| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Snas_4598 |
|---|
| Symbol | |
|---|
| ID | 8885803 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Stackebrandtia nassauensis DSM 44728 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013947 |
|---|
| Strand | - |
|---|
| Start bp | 4909394 |
|---|
| End bp | 4910122 |
|---|
| Gene Length | 729 bp |
|---|
| Protein Length | 242 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 63% |
|---|
| IMG OID | |
|---|
| Product | polar amino acid ABC transporter inner membrane subunit |
|---|
| Protein accession | YP_003513335 |
|---|
| Protein GI | 291302057 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 18 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 19 |
|---|
| Fosmid unclonability p-value | 0.224855 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGATGACT TCTGGGACGG CGCACTCGCC GCACAACTGT GGGACCCGCT GCTCGAAGGG
TTCATCATCA TCCTCGCGGT CACCATCCTG GCCTCGATCA TCTGCCTGGT GCTGGGACTG
ATCGTCGCGA TCGCGCTGCG GTCGGGCCCG CGCTGGCTGT CGGCCCCGTT GTTCGGCGTC
ATGGAGTTCA TCCGGAACAC GCCACTACTG GTGCAGCTGT TCTTCGCCTG GTTCGGTATC
GCGCTGGCCA TCGGGGTCAG CGACACCATC TTCACCGTGC CGACGTTCAG CATCGGCGGC
TGGGAGATCG GGCCGCTGGA CTTCGGCGGA CCGTTCTTCG TCGGCGTCAT CGTGCTGGGC
ATCCACTACT CGACCTACAC CGCCGAGGTG TACCGCGCGG GCATCGACGG TGTCCCGAAG
GGACAGTGGG AGGCCATCAC GGCGCTGTCA CTGCCCAAGC GGTACGGCTG GCAGCACGTG
ATCCTGCCGC AGGCACTGCG CCGGGTGATT CCCGCGCTGG GCAACTACAT CATCTCGATG
TTCAAAGAGG TCCCCGTCTT GATCGCGATC GGTCTGGCGG ACATGATTTA CAAGACGCAG
GAATTTCAGG CGGCGAACTT CGCCGGTGCC GTCGAGGGTT ACACCATCGC CGGTCTGATC
TTCCTGGCGG CGAGTTACCC GATCGCCGTG GCTATGCGCA AATTGGAGAA TCGCCTTGAA
CAGCAGTAA
|
|---|
| Protein sequence | MDDFWDGALA AQLWDPLLEG FIIILAVTIL ASIICLVLGL IVAIALRSGP RWLSAPLFGV
MEFIRNTPLL VQLFFAWFGI ALAIGVSDTI FTVPTFSIGG WEIGPLDFGG PFFVGVIVLG
IHYSTYTAEV YRAGIDGVPK GQWEAITALS LPKRYGWQHV ILPQALRRVI PALGNYIISM
FKEVPVLIAI GLADMIYKTQ EFQAANFAGA VEGYTIAGLI FLAASYPIAV AMRKLENRLE
QQ
|
|---|
| |