Gene Snas_4594 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSnas_4594 
Symbol 
ID8885799 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStackebrandtia nassauensis DSM 44728 
KingdomBacteria 
Replicon accessionNC_013947 
Strand
Start bp4906498 
End bp4907073 
Gene Length576 bp 
Protein Length191 aa 
Translation table11 
GC content70% 
IMG OID 
ProductRNA polymerase sigma-24 subunit, ECF subfamily 
Protein accessionYP_003513331 
Protein GI291302053 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.858642 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value0.063743 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCTCGG TGACGGTGTC ACGCATAGGA ACCGTCTGGG ACGCCTTCGA GGAGTTCTAT 
CGCGAGCATG TCGGGTCCAT TCAGGGCTTC ATCGCGCGTC GTGTCGATGA TCCGCATCTG
GCGGCCGACC TGACCGCGGA GGTCTTCCTC GCGGCCATGA ACTCGGCCCA CAGGTACCGG
CCGGGCAAGG GCACGTCGGC GGGCTGGTTG TTCGGCATCG CGCGCAACGT GGTCGCCAAC
GATCGTCGGC GCCGCGCGCG GGCCGCGCAG ATCGACCGGC GCATCTCGGG CCGGGCACTG
GTCGACGCGG AGGACCTGGC CGCGTTGGAC GACCGGATCG ACGCCGAAGC CCAGTCCCGG
CAGCTCTACG CGGCCATGGA CCGGTTGTCG GACGCCGAAC GGGCCGTCCT GGAACTGGTG
GCCCTCGACG GCCTGTCCGT GGCGGACGCC GCGGCCGCGT TGAGGATCCG GCCGACCGCG
GCGCGCAAAC GCCTGCACCG AGCACGAAAG AACATGCGGG ACCACCTGGC CCCGTCCGCA
CCGGCGCTTG TCGCCGCATC AACGGAGGCA CTGTGA
 
Protein sequence
MTSVTVSRIG TVWDAFEEFY REHVGSIQGF IARRVDDPHL AADLTAEVFL AAMNSAHRYR 
PGKGTSAGWL FGIARNVVAN DRRRRARAAQ IDRRISGRAL VDAEDLAALD DRIDAEAQSR
QLYAAMDRLS DAERAVLELV ALDGLSVADA AAALRIRPTA ARKRLHRARK NMRDHLAPSA
PALVAASTEA L