| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Snas_4582 |
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| Symbol | |
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| ID | 8885787 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Stackebrandtia nassauensis DSM 44728 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013947 |
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| Strand | - |
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| Start bp | 4888517 |
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| End bp | 4890436 |
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| Gene Length | 1920 bp |
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| Protein Length | 639 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | |
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| Product | Hemolysin-type calcium-binding region |
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| Protein accession | YP_003513319 |
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| Protein GI | 291302041 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 20 |
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| Fosmid unclonability p-value | 0.518219 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGGGATCA GTGTTGCCCA GTTGCGTGCC CTCAGTACCG AGAAGCTGAC CACCTCGGCG
GATACGGCCG TCGCGGTCGG CAAGGACGTG GAGACCCGGG CCGGGGAGAT CGTCGACGCG
GCGAAAAGCG CCGCCGGGGC CGGGTTCTGG GCCGGGGCCG ATGCGCAGGC GCAGAACGAC
CTGCTGGGAA CGTTCCCGGC GCCGTTGGAG GCGGCCAGCA GCGTCTTCAA GGCCGCGGCC
ACGACGCTTG ACACCCTGGT GGCCGAACTG GAGGGCGCCA AGTCCGACAT CGAGACGGCG
ATCGCGTCCT ATCCGGAGCA CAAGGTGCAG GACGACGGCA CCGTGACCTG GCCGCCCTCG
CCCGACGCCG CCACCGAGGC GAGACTGAGG CAGCAGGCGG AGGAGCTGTT CAACCTGCTG
CTGAAGGCGA TCGATCGGGC CAACGCGGCC GATGAATCGG CGGTGACGCA GCTGGCGCAA
AAGGACCTGG GTGCCGGGCC GGTGCCGGTG AAGCTGCCGG ACGGGTCGGT GTACCTGGCC
ACGGGGGACA AGGACAACGT CGTCAAGGTC AGTAATGACA AGGACGGGAA CCTGATCGCC
AACGTCGACG GCAAGGACTT CAGGTTCGAT CCCGGCACGC GGCTGACAGT CGACGGACAG
GCTGGCGACG ACAAGATCGA CATCGACAAG AACGTCAAGG AAGACGTCGC GGTGTTCGGC
GGCAAGGACG ACGACACGAT CCACGGCAGC GACAAGGCCA ACGTGCTCAA CGGGGGCGAC
GGCGCCGACG TGATCCACGG CGGGGGCGGG AACGACCGTA TCGATGCCGG AGGCAACTCA
AGCGGGTACG ACGTCGTCTA CGGCAACGAC GGCGACGACA CCATCACCGG TGGGAGCGGG
AACGATCGCG TCGCGGGTGG TGCGGGCAAC GACACCATCG ACGGCGGCCA GGGCAAGGAC
TATCTGGACG GACAACGGGA CGACGACACG ATCACCGGCG GTACCGAGGA CGACGTCATC
TACGGCCTCG AAGGTGAGGA TGTCCTGCGC GGCGAGGACG GCAACGACTA CCTGGAGGGC
GGCAGGGACA ACGACCGCAT CGACGGGGGT ATCGGCAACG ACACCATCTC CGGTGGCCAC
GGCGAGGACA CTTTGTCGGG CGGCGACGGT CGTGACGTGC TGTACGGCGG GCACGGCAAG
GACACGGTGG ACGGTGGCAG CGGGCTCGAC CAGGCGTATG TCCAAGAAGA GGACGCCATC
ACCAAGGACC GGTACGGCAT CGACACCGCC GAGCGCAACA ACGTCACGAT CTCCGACAAC
GCTGGCGTCT ACCAGGTCGA GGGCTCCGAC GACTTCAAAG CCCGGGTCCA AGCCGATCTG
GACATGATGG CGGCGTCTCC CACGGCGCAG CAGATGCTCG ACAAGCAGGC GGCCGAGTTC
GGCGGCTTCG ACGACTTCGT GCAGCCGGGC GAGGACACGC TGAAGATCGA GGAACTGAGC
TTCGACCCGA ACAACCCCCA CCGTGACCTC GAGAACGGTT ATGCCAGTTC TTCCCGGGAC
GGTCATGACA ACTCGCACAA CGTGATCGAG TACAACGCCG CCAAGAGTCT CGACGATCCG
GGAAGCGCGC CGTCCAATGT GCTCTACCAC GAGATGGCCC ACACCTACGA TTTCCGTCAC
GACCAGTTCG ACGAGGACCT TCACACCGAC ACCAGGTCAC CGGATACCGA CTACTCCGGT
GACGGCGTGC CGAACGGCGA ACGCACCGCT GTCGGTTTGC CCATCGACCA TGACGACAAT
CCGCAGACCG ACCTGAAGCT GCAGGAAGAC CATCCGTGGG CGCTGACCGA GAACGGACTG
CGCACCGAGC AGGGCAGGCC GTGGCGCCTC ACCTACGGCC TGCCCATCCC GCCGCGTTAG
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| Protein sequence | MGISVAQLRA LSTEKLTTSA DTAVAVGKDV ETRAGEIVDA AKSAAGAGFW AGADAQAQND
LLGTFPAPLE AASSVFKAAA TTLDTLVAEL EGAKSDIETA IASYPEHKVQ DDGTVTWPPS
PDAATEARLR QQAEELFNLL LKAIDRANAA DESAVTQLAQ KDLGAGPVPV KLPDGSVYLA
TGDKDNVVKV SNDKDGNLIA NVDGKDFRFD PGTRLTVDGQ AGDDKIDIDK NVKEDVAVFG
GKDDDTIHGS DKANVLNGGD GADVIHGGGG NDRIDAGGNS SGYDVVYGND GDDTITGGSG
NDRVAGGAGN DTIDGGQGKD YLDGQRDDDT ITGGTEDDVI YGLEGEDVLR GEDGNDYLEG
GRDNDRIDGG IGNDTISGGH GEDTLSGGDG RDVLYGGHGK DTVDGGSGLD QAYVQEEDAI
TKDRYGIDTA ERNNVTISDN AGVYQVEGSD DFKARVQADL DMMAASPTAQ QMLDKQAAEF
GGFDDFVQPG EDTLKIEELS FDPNNPHRDL ENGYASSSRD GHDNSHNVIE YNAAKSLDDP
GSAPSNVLYH EMAHTYDFRH DQFDEDLHTD TRSPDTDYSG DGVPNGERTA VGLPIDHDDN
PQTDLKLQED HPWALTENGL RTEQGRPWRL TYGLPIPPR
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