Gene Snas_4573 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSnas_4573 
Symbol 
ID8885778 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStackebrandtia nassauensis DSM 44728 
KingdomBacteria 
Replicon accessionNC_013947 
Strand
Start bp4878174 
End bp4879364 
Gene Length1191 bp 
Protein Length396 aa 
Translation table11 
GC content68% 
IMG OID 
Producthistidine kinase 
Protein accessionYP_003513310 
Protein GI291302032 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.159455 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value0.0817819 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCCGCAA CGACCGGAAC CGGGCTACGC TGCGCAGCCG TGAGGGAGCT TCAGCTGGCC 
CGGTTCCGGG TTCCATCGTG GGCGGCCATC GACCGGTTGC CGGGTTCGTC GGCGTCGCGG
ACGATCCGAT TCCTGGCGGT GGTGGGTGGT CTGACGGTGG TCTGTGCCTG GGTGTCGGCG
TACACCGTGC CGGAGCCGGG AACCGGCATG CCGCGAAGCG TCGGGGTCGC GCTGTGGGTG
GTCTACACGG TGAGCCTTTT GGTGCTGCCG GTCCGGCTGT GGCGCTCAAC GCTGTGGCAA
CGGCTGGCCA TGAACCTGTG GCTGAACCTG CTGGGCGTCG CGATCCTGTT CGCGTTCTGG
TTCACCGACA TCCTGGTGTT CCTGTTCTCC ATCGCCGTGG CCGCCGTGAC CCTGCCGATG
CTGATGGCGG TGAGCCTCAA CGGCGTGGTG CTGGGCGCGA TGTTCGCGCT GAGCGTCACG
GTCGCCGACA AGGAGATGTC GGGGGCCGAC ATGGCGGTGC TGATATCGAT CGCGATCAGC
GCCACCGTGA CCGGACAGCT GATCCGGACG GTGAACCAGC TGCGCGAAAC ACGGGCCGAG
CTGGCACGGC TGGCGGTGGT GAACGAACGC AACCGCTTGG CCCGTGACCT GCACGATGTG
TTGGGGCACA GTCTGACCAC GATCTCGGTG AAGGCGGGGC TGGCGCGACG GTTGCTGGAG
TCCGGAACCG ACGACAGGGC GAGGCTGGTC GCCGAAGTGT CCGATTCGGA GCGATTGGCT
CGGCAGGCCA TGACCGAGGT GCGCGCGGTG GTGTCGGAGT ATCGGACGAG CCTGCGGACC
GAGCTGGCCG GGGTCGCCGA AGCACTTGAC GCGGCGGGGA TCCGGGCGGT GCTGCCATCC
GTTGTGGACG TGGTTCCGGG GGAGTGGCAA CCGGCGTTCG CCTACGTGCT GCGGGAGGGC
GTGACCAACG TGATGCGGCA TTCGCGGGCC AGCGTGTGCG AGGTGCGCGT CGGTCCGAAC
TGGATCGAGG TCGTCGACGA CGGTCGGGGA TCGTCGGACG GCAAGCCCGG CAACGGCATC
ACCGGGCTAC GCGAGCGATT GGCGGTCGTC GGCGGCACCG TCACCGCGGG GCCGCGACCC
GATGGTGAGG GTTTTCGATT GCGGGCGGTC GTGCCGGGAG GCGCTGAATG A
 
Protein sequence
MAATTGTGLR CAAVRELQLA RFRVPSWAAI DRLPGSSASR TIRFLAVVGG LTVVCAWVSA 
YTVPEPGTGM PRSVGVALWV VYTVSLLVLP VRLWRSTLWQ RLAMNLWLNL LGVAILFAFW
FTDILVFLFS IAVAAVTLPM LMAVSLNGVV LGAMFALSVT VADKEMSGAD MAVLISIAIS
ATVTGQLIRT VNQLRETRAE LARLAVVNER NRLARDLHDV LGHSLTTISV KAGLARRLLE
SGTDDRARLV AEVSDSERLA RQAMTEVRAV VSEYRTSLRT ELAGVAEALD AAGIRAVLPS
VVDVVPGEWQ PAFAYVLREG VTNVMRHSRA SVCEVRVGPN WIEVVDDGRG SSDGKPGNGI
TGLRERLAVV GGTVTAGPRP DGEGFRLRAV VPGGAE