| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Snas_4571 |
|---|
| Symbol | |
|---|
| ID | 8885776 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Stackebrandtia nassauensis DSM 44728 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013947 |
|---|
| Strand | + |
|---|
| Start bp | 4876374 |
|---|
| End bp | 4877423 |
|---|
| Gene Length | 1050 bp |
|---|
| Protein Length | 349 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 72% |
|---|
| IMG OID | |
|---|
| Product | Nicotinate-nucleotide-dimethylbenzimidazole phosphoribosyltransferase |
|---|
| Protein accession | YP_003513308 |
|---|
| Protein GI | 291302030 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 13 |
|---|
| Plasmid unclonability p-value | 0.339012 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 18 |
|---|
| Fosmid unclonability p-value | 0.202601 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGAACGACG ACAATTCGGT ATTCGCCGAC GCGAGGGTCC CGTTCCCCGA CGCCGCCTAC
GCCACCCGCG CCTCCAACCG GCTGGTCGAG GCTCTCGTCC CCGGTACCGG GCTCGGCACG
CTGACCCCCG CCATCGCCTG GTCGGGCCGG GTGCAGGGCA CCGACGCGCC CCGGCCGTTT
CGCGACATCA CGGGCCTGAT CGTGTCCGGC GGTCACGACG GTGACTTCGC GTACGCCGAC
GATCCGGCCG ACGAGTCGAT CCTGACCCGG CTGGCCGAGC GGGCGGGCGT GTCGCTGCGG
CGGCTGGAGA CCGTCACGGG CGCCGCCGCC GAGACCGGCC CGGTGTTGTC CGAGGACCAG
TATCTGGAGT GTCTGGAGAT CGGCAAGCAG GCGGCCGACG CCAGCATCGA CTCCGGCGCC
GACCTGCTCG TCCTGTGTGG TCTCGGACCG GGCACCCGGA CGGCCGCCAT CGCCGTCACC
GCGCACCTGA CCCGGATTCC GCCCGTCGAG CTGTCGCCCC GGCTGCGACT GCCGGGCGGC
GTCATCGACG ACAACGCCTG GATGCGCCGC ACCGCGGCCA TCCGCGACGC CTTCACCCGG
CTGGGCGGTC CGGGACGCAA GGCCCAGACG ATGCTGACCG AACTGGGCGG TCCGGTGATG
GCGACGCTGA CCGGGATCAT CGTGGCCGCG GCGATCCGTC GCACCCCGAT GCTCATCGAC
GGGCCGGTCG CGGCGGCCGC CGCGTTGGTG TCGCGGGACT TCTCGCTGGG TGCCCCGAAG
TGGTGCTACG CCCCCGACCG GATCCCGCAC CCGGTGGTGG AGCGGGTCGC TGGCCAGACG
GGCATGGCCG AGCCGATCGG TTTTGGCGTC GATGTCGGCG AGGGCTGCGC GGCGATGCAG
GCTATCCCGC TGTTGCAGCA GACGCTGCGG CTGTTCGACG AGCTCCCGTT CCCTGAGCCC
GAACCGGAGC CGGAACCCGA GCCGGAGAAG GAAACCGACG ACGGCGCCGC CGCTGACGAC
GAAACGGTCG AGGACAAGAG CGAGGACTAG
|
|---|
| Protein sequence | MNDDNSVFAD ARVPFPDAAY ATRASNRLVE ALVPGTGLGT LTPAIAWSGR VQGTDAPRPF
RDITGLIVSG GHDGDFAYAD DPADESILTR LAERAGVSLR RLETVTGAAA ETGPVLSEDQ
YLECLEIGKQ AADASIDSGA DLLVLCGLGP GTRTAAIAVT AHLTRIPPVE LSPRLRLPGG
VIDDNAWMRR TAAIRDAFTR LGGPGRKAQT MLTELGGPVM ATLTGIIVAA AIRRTPMLID
GPVAAAAALV SRDFSLGAPK WCYAPDRIPH PVVERVAGQT GMAEPIGFGV DVGEGCAAMQ
AIPLLQQTLR LFDELPFPEP EPEPEPEPEK ETDDGAAADD ETVEDKSED
|
|---|
| |