Gene Snas_4558 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSnas_4558 
Symbol 
ID8885763 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStackebrandtia nassauensis DSM 44728 
KingdomBacteria 
Replicon accessionNC_013947 
Strand
Start bp4862031 
End bp4862732 
Gene Length702 bp 
Protein Length233 aa 
Translation table11 
GC content70% 
IMG OID 
ProductFHA domain-containing protein 
Protein accessionYP_003513295 
Protein GI291302017 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.734696 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value0.600956 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAGACCT GCCCCAACCG CCATTCGGTG CACGATCACC TCGAGTACTG CGAGGAATGC 
GGCAGCCGGG TCGAATCGAC TCCCACCAGG CTGTTCCAGC CCGCGCCGCC ACCGCCCCCG
CAGCAGCAGG TGCAGCTGTG GACCTGCTCG CACTGCCACA CCCAGCAGGG GCTGAGCCGC
TACTGCGAGG CCTGCGGCGA ACCCAATCCG CGCCACCCCG AGTACGCGGA CGAACCCACC
GACGAGATCG AGCAGCAGTA CCGCGCCCCC GAACCGCCGC CGCCACCGCC GATGGCCACG
GCGCGGATCA CGGTCACGGC CACCGCCGAT CGGGCGTTCT TCGACCGGAT GCAGTCCCAC
GACGGCCCCG ACGCGGGCAC GCTGATGTTC CCGGCGGTGT ATCCGCCCCG GACCTTCACA
CTGGAGCGTC CGCAGATCTT CATCGGACGC CGCAGCCGTT CCCGGGGCAT CGAACCCGAC
ATCGACCTGT CCGGCGCCCC GGAGGACTCG GGTGTGTCAC ACGCGCACGC CGCGATCATC
AACGCCGAGG GCCGCTGGTG CGTCGTCGAC GTCGGCTCGT CCAACGGCAC CTACCTCAAC
ATGGCGCCCG AACCGATTCC GGCCAACACA CCGACCCTGC TCAACCACGG CGACCGGATC
CACCTGGGGG CCTGGACGAC GCTGACGGTC AGCTTCGGCT GA
 
Protein sequence
MKTCPNRHSV HDHLEYCEEC GSRVESTPTR LFQPAPPPPP QQQVQLWTCS HCHTQQGLSR 
YCEACGEPNP RHPEYADEPT DEIEQQYRAP EPPPPPPMAT ARITVTATAD RAFFDRMQSH
DGPDAGTLMF PAVYPPRTFT LERPQIFIGR RSRSRGIEPD IDLSGAPEDS GVSHAHAAII
NAEGRWCVVD VGSSNGTYLN MAPEPIPANT PTLLNHGDRI HLGAWTTLTV SFG