| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Snas_4555 |
|---|
| Symbol | |
|---|
| ID | 8885760 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Stackebrandtia nassauensis DSM 44728 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013947 |
|---|
| Strand | + |
|---|
| Start bp | 4857380 |
|---|
| End bp | 4859710 |
|---|
| Gene Length | 2331 bp |
|---|
| Protein Length | 776 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 70% |
|---|
| IMG OID | |
|---|
| Product | serine/threonine protein kinase |
|---|
| Protein accession | YP_003513292 |
|---|
| Protein GI | 291302014 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 14 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 20 |
|---|
| Fosmid unclonability p-value | 0.550523 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGAACTCGA GTCCCTGCAC TCAGCCAGGC TGTTCCGGTT CCTACGGGCC CGAGGGCTAC
TGCGACGTGT GCGGTTCCCG CAACCCGCAG GCCGTCGCGC CGCAGCCCAC GTCGGCGCCG
CCGGTGTCGG GCGCTCCGGT GTCCGCGCAG CAGGTGTCGG CCCCGCCCAC CTCGGCCCCG
CCCAGCACAG TCTCCAGTGG ACCGGTGACG GCGGCGGGTT CGCAGGCGAC CCAGACCTCG
GGTTCCCGGG CCACCCGCGC CACCGGCACC CAGCCGTTCT CCTCGACCAG CCGCTCCCGG
TTCGGCGGCG GTATGACCGA CATCCCGCCG GTGCCGATCC GCGATCCCAA CGAGGCGGTG
CTCGACAACC CGCAGGTTCC CGAGCACAAG CGCAACTGCT CCAAGTGCCA CAAGCCCGTC
GGGCGCACCG GACCCGACGG CAAACCCGGT CGCACCCAGG GGTTCTGCCC GCACTGCCGC
AACCGGTTCT CGTTCGTGCC CAGCCTGGTG CAGGGCGACA TGGTGGCCGG ACGCTACGAG
ATCCTGGGCG CGATGGCCCA CGGTGGGCTG GGCTGGATCT ATCTGGCCCG GGACAAGAAC
ATCGGCGACG ACGTCGCCGA ACGCTGGGTC GTCCTGAAGG GACTCATCGA CTCCAGCGAC
CCCGACGCCA TCGACTCGGC CATCGCCGAG CGGCGGTTCC TGGCCGCCCT GGACCACCCC
AACATCGTCC AGATCTACGA CTTCGTCCGG CATCCCGACC CGCGCACCAA CGAGCCGCTC
AGCTACATCG TGATGGAGTA CGTCCCCGGC AAGTCGCTGC GGGACCTGCG CAAGGAGTAC
GTCGACGAGA CCGGCGTCCA CTCGCCGCTG CCGCTGTCGC AGGTGCTGAC GTACCTGGTG
GAGATCCTGC CCGCCCTGGG CTACCTGCAC GGCCAGGGAC TGCTGTTCTG CGACTTCAAG
CCCGACAACG TCATCCACGT CGAGTCCTGG CTCAAGCTGA TCGACCTGGG CGCGGTGCGC
CGCCTCGACG ACGACGAGTC GGCGGTGTTC GGCACCCCCG GCTACGCGGT GTCCGACGAC
GAGATCATCA ACCACGGGCC GTCGATCTCC TCGGATCTGT ACACTGTGGC GCGTTCGGCG
GCGGTGCTGT CCTTCGAGTT CGGCAACTTC TCGCGCGGCG AGTTCCGCAA CAAACTGCCC
GGCCCGCAGA CGCAGCCGCT GCTGGCCCGG TTCGAGTCGT ACCGGCGGTT CCTGGAACGG
GCCACCGATC CCGAGCCGTC GCGCCGGTTC GCCACCGCCG CGGAGATGCG CGAGCAGCTC
ATCGGGGTGC GCCAGGAGGT GCTCAGCCTG GAGCGGGCCT ACCCGCACGG CAACTCCTCG
GTGCTGTTCA CGCCCGAACA GCGGCACTTC GGGGTGCCCG ACGCCCGCAC CGGCGAGTTC
ACCGCGCCGC GCGGCCCCGA CATCGCCACC GCGCTGCCCT ACCCGTTCGT CGACAGCGAC
GACCCCTCGG CGGGTTTCCT GGCGACCCTG TCGGCCACCG ACCCGATGGA CATCCTGTAC
GAGCTGCAGA ACGCGCCGGA GAACTCCGCC GAGGTGCGGC TGCGGCGGGT GCGCGCCAAC
ATCGCCTACG GCAACCTGAA AGCCGCGGGC ATGAACCTGG ACCAGTACGC CGAGACCGGA
ACCGGCGACT GGCGCATCAC CTGGTGGCGC GGCGTCATCG GGTTGCTGTC GGACAACCCG
GCCGAGGCGC GCGGGCACTT CGACGCCCTG TACAGCCATC TGCCCGGTGA GATCGCGCCG
ATGCTGGCGC TGGCGGCGGC CTGCGAACTG TCCGGCGACA CCACCGCGGC CCTGGGCCTG
TACTCGCGGA TCTGGCAGAC CGACCGCCGT TACGTGTCCG CCGCGTTCGG GCAGTCGCGG
CTTTTGGCCC GCGACGGTCA CGCCGACCCG GCGATCCACG TCCTGGACGC GGTTCCCGAT
TCGTCCAGTC AGTACACCAC CGCCAAGGTG GCGACGATCG CGTTGCGGCT GGCCAGCGCC
GCCGGACCCG ACTTCGTCCG CGACGCCGCG CAGCGGCTGA CCGGGCTGGA CCTGCCCGAG
CACCACCATC ATCTGCTGCG GGCCCGCATC CTGCTGGCCT GTCTGCGGCA TGTCAACGGC
GCCCAAGGCG TCCCGTCACC GCCTATCCTG GAGCACCCCC TGGAGGAGAA GGCACTGCGG
TTCGGCTTGG AGGAGACGTA CCGGCGGCTG GCTCGTACCA GCTCGGCGCG TGATGACCGG
ATTCGCTTCA TCGACGAGGC GAATAAGATC CGACCGTGGA CGATGGTGTA A
|
|---|
| Protein sequence | MNSSPCTQPG CSGSYGPEGY CDVCGSRNPQ AVAPQPTSAP PVSGAPVSAQ QVSAPPTSAP
PSTVSSGPVT AAGSQATQTS GSRATRATGT QPFSSTSRSR FGGGMTDIPP VPIRDPNEAV
LDNPQVPEHK RNCSKCHKPV GRTGPDGKPG RTQGFCPHCR NRFSFVPSLV QGDMVAGRYE
ILGAMAHGGL GWIYLARDKN IGDDVAERWV VLKGLIDSSD PDAIDSAIAE RRFLAALDHP
NIVQIYDFVR HPDPRTNEPL SYIVMEYVPG KSLRDLRKEY VDETGVHSPL PLSQVLTYLV
EILPALGYLH GQGLLFCDFK PDNVIHVESW LKLIDLGAVR RLDDDESAVF GTPGYAVSDD
EIINHGPSIS SDLYTVARSA AVLSFEFGNF SRGEFRNKLP GPQTQPLLAR FESYRRFLER
ATDPEPSRRF ATAAEMREQL IGVRQEVLSL ERAYPHGNSS VLFTPEQRHF GVPDARTGEF
TAPRGPDIAT ALPYPFVDSD DPSAGFLATL SATDPMDILY ELQNAPENSA EVRLRRVRAN
IAYGNLKAAG MNLDQYAETG TGDWRITWWR GVIGLLSDNP AEARGHFDAL YSHLPGEIAP
MLALAAACEL SGDTTAALGL YSRIWQTDRR YVSAAFGQSR LLARDGHADP AIHVLDAVPD
SSSQYTTAKV ATIALRLASA AGPDFVRDAA QRLTGLDLPE HHHHLLRARI LLACLRHVNG
AQGVPSPPIL EHPLEEKALR FGLEETYRRL ARTSSARDDR IRFIDEANKI RPWTMV
|
|---|
| |