Gene Snas_4546 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSnas_4546 
Symbol 
ID8885751 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStackebrandtia nassauensis DSM 44728 
KingdomBacteria 
Replicon accessionNC_013947 
Strand
Start bp4848538 
End bp4849224 
Gene Length687 bp 
Protein Length228 aa 
Translation table11 
GC content69% 
IMG OID 
Productiron (metal) dependent repressor, DtxR family 
Protein accessionYP_003513284 
Protein GI291302006 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.229344 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones23 
Fosmid unclonability p-value0.851702 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCACCG ACCTTGTCGA CACCACCGAG ATGTACCTGC GGACCATTCT GGAGCTGGAG 
GAAGAGGGTG TCACGCCGCT TCGCGCGCGC ATCGCCGAAC GCCTGGCGCA AAGTGGCCCC
ACGGTGAGCC AGACCGTCGC CAGGATGCAG CGCGACGGCC TCCTCAACGT GCTGGGCGAC
CGCCACCTGG ACCTGACCGA TCTGGGCCGC GAGCGGGCGG TGTCGGTCAT GCGCAAGCAC
CGGCTGGCCG AACTGCTGCT GGTCGACGTC ATCGGCATGT CGTACGAGGA CGCCCACGAC
GAGGCCTGTC GCTGGGAGCA CGTGATGAGC GACGCCGTGG AGCAGAAGGT CTTCGAGCTG
CTGAACAAGC CGACCCGCTC CCCGTACGGC AACCCGATTC CGGGGCTGGA GGCGCTGGGT
TCCGACGCGG CGACCACCAC CTTCGACCCC GCCGAGCGCC ACCTGGCCTC GGCCGGTCTG
AGCGGCTCCT TCCGGGTGAC CCGGCTGTGC GAGAGCGTCC AGACCGACGC CGCGGTCCTG
CACGACCTGC ACTCCGCGGG CGTCAACCCG GGCGCGGTCG TGGACGTCAA GCGCCGTGAC
GACGTCATCG AGCTGCGGCA TGACAACGTC GCCACGAGCC TGTCGGTCCA GGACGCCAGC
CGCGTCTTCG TAGTACCGGC TGCCTGA
 
Protein sequence
MTTDLVDTTE MYLRTILELE EEGVTPLRAR IAERLAQSGP TVSQTVARMQ RDGLLNVLGD 
RHLDLTDLGR ERAVSVMRKH RLAELLLVDV IGMSYEDAHD EACRWEHVMS DAVEQKVFEL
LNKPTRSPYG NPIPGLEALG SDAATTTFDP AERHLASAGL SGSFRVTRLC ESVQTDAAVL
HDLHSAGVNP GAVVDVKRRD DVIELRHDNV ATSLSVQDAS RVFVVPAA