| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Snas_4536 |
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| Symbol | |
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| ID | 8885741 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Stackebrandtia nassauensis DSM 44728 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013947 |
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| Strand | + |
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| Start bp | 4839889 |
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| End bp | 4841568 |
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| Gene Length | 1680 bp |
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| Protein Length | 559 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | |
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| Product | RNA polymerase sigma 70 subunit, RpoD subfamily |
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| Protein accession | YP_003513274 |
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| Protein GI | 291301996 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.222967 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 22 |
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| Fosmid unclonability p-value | 0.785726 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGACAGACG CGAGCCCCAA CGGTACTGAT GTCCGTTCAC TCACGGAATC GCTGCTCCAA
CTGGCAGGCG AACGGGGTGG TCAACTCGCC TCCGCCGAGG TTGCCACATT CCTTGAGTCG
GCGCAGGTGG CCCCGGCGCA GGGCAAGAAG ATCCTGCGCG CCCTGGCCAA CGCCGACGTG
ACCGTCGTCG TGGACGACTC GGCCAAGCCG CGCCGTGCGG TTCCGGCGGC GCGCTCGGCG
ACCGCCGCCT CCAAGGCGAC CACGGCCAAG GCCGAGACCA AGCAGCCGGC GGCGAAGAAG
GCGGCCAAGA AGGCCACCAA GGCCGCGGCC AAGAAGACCA CCGCCAAGAA GAAGGCGACG
GACGAGGCCG CGACCGACGC CGAGCTCACC GACGTCGAGC AGGCTGACGG CGAGGCCAAG
ACCGCGGCCA AGAAGACCGC GGCGAAGAAG ACCGCCAAGA AGGCCACCAA GGCCGCCGTC
AAGAAGACGG CGAAGAAGGC GACCGCCAAG AAGGCCACCG ACGCCAACGG CGACGAGGAG
CCGACCGCCG CCGACCTGGC CGCCGCCGAG GGCGATGACG ACCTCGCCGC CGAGGCCGCC
GCCAAGAAGT CAACCCGCAA GTCCGCGAAG AAGACCGCCA AGAAGTCGTC CAAGAAGGAC
GGCAAGAAGG ACGAGGACGG CGAGGGCTCG GACGGCTTCG ACTGGGACGA CGAGGACTCC
GAGGCGCTGA AGCAGGCCCG CAAGGACGCC GAGATGACCG CCTCGGCGGA CTCGGTACGC
GCCTACCTCA AGCAGATCGG CAAGGTGCCG CTGCTGAACG CGGCCCAGGA AGTCGAACTG
GCCAAGCGCA TCGAGGCGGG TTTGTACGCC GTCGAGCGGC TGCGTCAGCT CAAGGAGGCC
GGCGAGGAGA TCCCGACCCA GGTCCGCCGG GACCTGGAAT GGGTCACCCG CGACGGCGAC
CGCGCCAAGA ACCACCTGCT GGCCGCGAAC CTGCGGCTGG TGGTGTCGCT GGCCAAGCGC
TACACCGGTC GCGGCATGGC GTTCCTGGAC CTGATTCAGG AGGGCAACCT CGGCCTGATC
CGCGCCGTGG AGAAGTTCGA CTACACCAAG GGCTTCAAGT TCTCCACCTA CGCCACCTGG
TGGATCCGCC AGGCCATCAC CCGCGCCATG GCCGACCAGG CCCGCACCAT CCGGATACCG
GTGCACATGG TCGAGGTCAT CAACAAGCTG GGCCGGATCC AGCGCGAGCT GCTGCAGGAC
CTCGGACGCG AACCCGCGCC GGAGGAACTG GCCAAGGAGA TGGACATCTC CCCGGAGAAG
GTCCTGGAGA TCCAGCAGTA CGCGCGCGAG CCGATCTCGC TGGACCAGAC CATCGGCGAC
GAGGGCGACA GCCAGCTGGG TGACTTCATC GAGGACTCCG AGGCGGTCGT GGCCGTCGAC
GCGGTGTCGT TCTCGTTGTT GCAGGGCCAG TTGCAGCAGG TGTTGCAGAC CCTGTCGGAA
CGTGAGGCGG GCGTGGTACG GCTGCGCTTC GGTCTCACCG ACGGTCAACC GCGCACTTTG
GACGAGATCG GGCAGGTCTA CGGAGTGACG CGGGAGCGGA TCCGGCAGAT CGAGTCCAAG
ACGATGTCGA AGCTGCGGCA CCCGTCCCGC TCCCAGGTTC TGCGCGACTA CCTCGACTAG
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| Protein sequence | MTDASPNGTD VRSLTESLLQ LAGERGGQLA SAEVATFLES AQVAPAQGKK ILRALANADV
TVVVDDSAKP RRAVPAARSA TAASKATTAK AETKQPAAKK AAKKATKAAA KKTTAKKKAT
DEAATDAELT DVEQADGEAK TAAKKTAAKK TAKKATKAAV KKTAKKATAK KATDANGDEE
PTAADLAAAE GDDDLAAEAA AKKSTRKSAK KTAKKSSKKD GKKDEDGEGS DGFDWDDEDS
EALKQARKDA EMTASADSVR AYLKQIGKVP LLNAAQEVEL AKRIEAGLYA VERLRQLKEA
GEEIPTQVRR DLEWVTRDGD RAKNHLLAAN LRLVVSLAKR YTGRGMAFLD LIQEGNLGLI
RAVEKFDYTK GFKFSTYATW WIRQAITRAM ADQARTIRIP VHMVEVINKL GRIQRELLQD
LGREPAPEEL AKEMDISPEK VLEIQQYARE PISLDQTIGD EGDSQLGDFI EDSEAVVAVD
AVSFSLLQGQ LQQVLQTLSE REAGVVRLRF GLTDGQPRTL DEIGQVYGVT RERIRQIESK
TMSKLRHPSR SQVLRDYLD
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