Gene Snas_4525 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSnas_4525 
Symbol 
ID8885730 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStackebrandtia nassauensis DSM 44728 
KingdomBacteria 
Replicon accessionNC_013947 
Strand
Start bp4830993 
End bp4832156 
Gene Length1164 bp 
Protein Length387 aa 
Translation table11 
GC content72% 
IMG OID 
Productdeoxyribonuclease/rho motif-related TRAM 
Protein accessionYP_003513263 
Protein GI291301985 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value0.48067 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATCGTCG ACATCGGGCC CGTCGCGCAC GGCGGCGCCT GCGTCGCCCG CCACGAGGGC 
CGCGTCATCT TCGTCCGCCA CGCCCTGCCC GGCGAACGCG TCCGGGTAGA GATCACCGAA
CGCAAGAAGA GCTACTGGCG CGGCGACGCC GTCGAGATCC TCGACGCCTC CCCCGACCGC
GTCCCCGCCC CGTGCCGATA CGCGGGCACC TGCGGCGGCT GCGACTTCCA GCACGTCTCG
GCCGCCGGCC AGCTCCGCCT CAAGACGGCG GTCCTGCGCG AACAGCTCAC CCGCCTGGCC
GGGCTCCCCG AATCCGAGGT GTCGGACTAC ACCGTCGAGG CCCTGCCCGG CGGCCTGCTC
GGCTGGCGCA CCCGCATGCA GTACTCAGTG GACAACACCG GCCGCCCGGG GCTGCGCGGC
CACCGTTCCC GCGACCTGGT CCCGATCGAC GACTGCCTCA TCGCCGACGA TCGCATCCGC
GCCACCGACG TCCTGGGCCG CAACTGGAAG GGCTCCAACG TCGTCGGCGT GGCCGCCTCG
GACGCGGACG AGGTCTCCGT CTACACCCAG CGCGACCGCC GCGGCAAAGC CCGCCTCGTC
TCGGGCCCCC CGCTGGCCGA ACACATCGTC TCCGGCCACT GGTTCCGCCT CGACGCGGAA
GCCTTCTGGC AACCCCACAC CCTGGCCGCC GACACCCTCG CCTCCCGGGT CACCGAACTC
AGCCAACCCG CCGACGCCGA AACCGTCTGG GACCTCTACG CGGGCGCGGG CCTGTTCGCG
GCCGTCCTCG CCGACGAGGT CGGCCCCTCG GGCCGAGTCA TCGCCGTCGA ATCCGACACC
CGCGCCGCCA CGGCCGCCAA CCTCGCCGAC CTACCCCAGG TCGAGGTCCG CCGCTCCGAC
GTCGCCGAAG CCGTCCACCA CCTGCCCAGC CCCGACATCG TGGTCCTGGA CCCACCCCGC
TCCGGCGCCG GAGCCGACCT CGTCAAAGCG ATCGCGGCGG CCGCGCCCCG CGTCATCACC
TACGTCGCCT GCGACCCCGC CGCACTGGCT CGCGACCTGA AGACGTTCGC CGCCAACGGC
TACAGCATTT CCACATTGGA AGCCTACGAT GCCTTCCCGA TGACCCACCA CTTCGAGACG
ATCGCGGTAC TGCGGCGCGA CTGA
 
Protein sequence
MIVDIGPVAH GGACVARHEG RVIFVRHALP GERVRVEITE RKKSYWRGDA VEILDASPDR 
VPAPCRYAGT CGGCDFQHVS AAGQLRLKTA VLREQLTRLA GLPESEVSDY TVEALPGGLL
GWRTRMQYSV DNTGRPGLRG HRSRDLVPID DCLIADDRIR ATDVLGRNWK GSNVVGVAAS
DADEVSVYTQ RDRRGKARLV SGPPLAEHIV SGHWFRLDAE AFWQPHTLAA DTLASRVTEL
SQPADAETVW DLYAGAGLFA AVLADEVGPS GRVIAVESDT RAATAANLAD LPQVEVRRSD
VAEAVHHLPS PDIVVLDPPR SGAGADLVKA IAAAAPRVIT YVACDPAALA RDLKTFAANG
YSISTLEAYD AFPMTHHFET IAVLRRD