| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Snas_4523 |
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| Symbol | |
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| ID | 8885728 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Stackebrandtia nassauensis DSM 44728 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013947 |
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| Strand | - |
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| Start bp | 4827700 |
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| End bp | 4829634 |
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| Gene Length | 1935 bp |
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| Protein Length | 644 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | |
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| Product | deoxyxylulose-5-phosphate synthase |
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| Protein accession | YP_003513261 |
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| Protein GI | 291301983 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 21 |
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| Fosmid unclonability p-value | 0.538152 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAACCGCG GAGACTCCGC TGCGGCGGGA GAACTACTGA GCACCCTGAC CAGCCTGGCC
GAGTTCAAGA AATTGCCGGT CGAAGCGCTG CCGAGCCTGG CGGCGGAGAT CCGGGACTTC
CTGGTCGACC GGGTGTCGCG CACCGGGGGG CACATCGGGC CCAACCTGGG CGTGGTGGAG
CTGACCATGG CGCTGCACCG GGTGTTCGAC TCCCCGCACG ACCGGATCGT CTTCGACACC
GGGCACCAGT CGTACGTGCA CAAGATCCTC ACCGGCCGGG CCGAGCGCTT CGACAAGATG
CGCAAACGCG GCGGGCTGAC CGGTTACCCG TCGCAGTCCG AGAGCCGTCA CGACCTGGTG
GAGAACTGCC ACGCGTCCAC CGCTCTGTCC TATGCGGATG GTCTGGCGAA GGCGACCGTG
GTGCGCGGCG ACAACCGGCA CGTGGTCGCC ATCGTCGGCG ACGGCGCGCT GACCGGCGGC
ATGTGCTGGG AGGCGCTGAA CAACATCGCC GCCCGCAAGG ACCTGCCGCT GGTGATCGTC
GTCAACGACA ACGGCCGCTC CTACGCCCCG ACCATCGGCG GGCTGGCCAA CCACCTGGCT
ACGCTGCGGC TGAACCCGTC CTACGAGAAG ATGCTCGACA CGGTCAAGGA CGCGCTGGGC
CGCACTCCGG TGGTGGGGCA GCCGCTGTTC GAGGCGATGC ACGCCGTCAA ACGCGGCATC
AAGGACGCGG TGGCGCCGCA GGCCATGTTC GAGGACCTCG GCATCAAGTA CTTCGGTCCG
GTGGACGGCC ACGACCTGGA CGCGATGACC AGCGCGCTGG AGCGCGCCAA GGGCTTCGGC
GGTCCGGTGA TCGTCCACGC CATCACGCAG AAGGGCAAGG GTTACCAGCC CGCCGAGGAC
GAGCCCGACG ACCAGATGCA CCAGTCCAAC GCCTTCGACC CCGACACCGG GCAGGCGCTG
CCGGGCGGTG GCGGCGTCAA GTGGACCTCG GTGTTCGCCG ACGAGCTGGT GGCCGTGGCC
GACGAGCGCC CCGACGTCGT GGGCATCACC GCTGCGATGG CCAAGTCCAC CGGTATCGCG
AAGCTCGCCG ACAAGCATCC CGACCGGGCC TTCGACGTCG GCATCGCCGA GCAGCACGCC
GTCACCTCGG CGGCCGGGAT GGCGCTGGCG GGGCTGCACC CGGTGGTCGC GGTGTACTCG
ACGTTCCTCA ACCGGGCCTT CGACCAGGTC GCGCTGGACG TGGCCATGCA CAAGCTGCCG
GTGACGTTCG TGCTGGACCG TTCCGGCATC ACCGGCCCGG ACGGGCCCAG CCACTACGGC
ATCTGGGACA TGTCGGTGTT CCGCGCGATC CCGGGCCTGC GCATCGCCGC TCCCCGGGAC
GCTGAGACGC TGCGGGAGGA GTTCCGCGAG GCGCTCGACG TGAATGACGC GCCGACGATC
GTGCGCATCC CGACCGGCAC CATCAGCGCG GAACTGCCCG CGATCGAAAA CGTCGACGGC
GTGGACGTCA TGGCGCGCGG CGAGACCAAG GACGTCCTGT TGGTGGCGTG CGGTTCCTTC
GTCGGTTCGG CGCTGGACGC CGCGGCCCGG GTCACCGAGC ACGGTTTCGG TGTCACCGTC
GTGGACCCGC GTTGGGTGGC GCCGGTGCCG CGGGCGCTGA CGTCGATGGC CGCCGAGCAC
CGGCTGGTGG TGACCGTCGA GGACGGGCTG CGCACCGGTG GTTTCGGTGA CGCGCTGGCC
AAGTCGCTGC GCGACGCCGA GGTGGACACG CCGCTGCGGG ACCTCGGGGT GGCGGCGGGC
TGGCACGAGC ACGGCACCCG TGACGAGCTG CTGGCCGACC TGGGCCTGAC CACCCAGGAC
CTGTCGCGCG CGATCACCGA GACGATCCTG AAGATCGCCG AGGCCGACGC CGAACCGTTG
CGCGTCGACG GCTGA
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| Protein sequence | MNRGDSAAAG ELLSTLTSLA EFKKLPVEAL PSLAAEIRDF LVDRVSRTGG HIGPNLGVVE
LTMALHRVFD SPHDRIVFDT GHQSYVHKIL TGRAERFDKM RKRGGLTGYP SQSESRHDLV
ENCHASTALS YADGLAKATV VRGDNRHVVA IVGDGALTGG MCWEALNNIA ARKDLPLVIV
VNDNGRSYAP TIGGLANHLA TLRLNPSYEK MLDTVKDALG RTPVVGQPLF EAMHAVKRGI
KDAVAPQAMF EDLGIKYFGP VDGHDLDAMT SALERAKGFG GPVIVHAITQ KGKGYQPAED
EPDDQMHQSN AFDPDTGQAL PGGGGVKWTS VFADELVAVA DERPDVVGIT AAMAKSTGIA
KLADKHPDRA FDVGIAEQHA VTSAAGMALA GLHPVVAVYS TFLNRAFDQV ALDVAMHKLP
VTFVLDRSGI TGPDGPSHYG IWDMSVFRAI PGLRIAAPRD AETLREEFRE ALDVNDAPTI
VRIPTGTISA ELPAIENVDG VDVMARGETK DVLLVACGSF VGSALDAAAR VTEHGFGVTV
VDPRWVAPVP RALTSMAAEH RLVVTVEDGL RTGGFGDALA KSLRDAEVDT PLRDLGVAAG
WHEHGTRDEL LADLGLTTQD LSRAITETIL KIAEADAEPL RVDG
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