| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Snas_4521 |
|---|
| Symbol | |
|---|
| ID | 8885726 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Stackebrandtia nassauensis DSM 44728 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013947 |
|---|
| Strand | - |
|---|
| Start bp | 4825758 |
|---|
| End bp | 4826429 |
|---|
| Gene Length | 672 bp |
|---|
| Protein Length | 223 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 70% |
|---|
| IMG OID | |
|---|
| Product | two component transcriptional regulator, winged helix family |
|---|
| Protein accession | YP_003513259 |
|---|
| Protein GI | 291301981 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 17 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 20 |
|---|
| Fosmid unclonability p-value | 0.315032 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCGGGTAC TGGTGATAGA GGACGAGGTT CGACTGGCCG AGGCGATCGC GCGGGGGTTG
CGGCGCCACG GGATGGCCGT CGACGTCGTC CACGACGGCC TGTCCGGGCA TCAAGAGGCC
ACCACGGTCC GCTACGACGT CGTCGTGCTC GACCGGGACC TGCCGGGCAT GCACGGGGAC
AAGGTGTGCG CCGACATCGC GCGGCGCGGG GCGCTGACCC GCATCCTCAT GCTCACCGCC
AGCGGCACCC TGGCCGACAA GGTCAACGGC CTCAACATCG GCGCCGACGA CTACCTGTCC
AAGCCGTTCG CGTTCGACGA ACTCGTGGCC CGGGTGCAGG CGTTGGGGCG CCGCGCCACC
CCGGCCGCGC CGCCGGTGCT GCACGCCGCC GACGTGGAAC TGAATCCGGC CGCCCACACC
GCGACCCGGG GCGGGCGCGA CCTCGAACTG ACCCACAAGG AGTTCGGCCT GCTGGCGGAA
CTGATCAAGG CGGGCGGGAC GCTGGTGTCG ACCGAGGAAC TGCTGGACCG GGTGTGGGAC
GCCCACGCCG ATCCGTTCAC CTCTACGGTG CGGGTCACGA TGCGCACGCT GCGCCGCAAG
CTCGGCGAGC CGCCGCTGAT CGACAACGTG CCGAAGGTCG GCTATCGCAT CAACATGGCG
GCCGATAAAT GA
|
|---|
| Protein sequence | MRVLVIEDEV RLAEAIARGL RRHGMAVDVV HDGLSGHQEA TTVRYDVVVL DRDLPGMHGD
KVCADIARRG ALTRILMLTA SGTLADKVNG LNIGADDYLS KPFAFDELVA RVQALGRRAT
PAAPPVLHAA DVELNPAAHT ATRGGRDLEL THKEFGLLAE LIKAGGTLVS TEELLDRVWD
AHADPFTSTV RVTMRTLRRK LGEPPLIDNV PKVGYRINMA ADK
|
|---|
| |