Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Snas_4515 |
Symbol | |
ID | 8885720 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Stackebrandtia nassauensis DSM 44728 |
Kingdom | Bacteria |
Replicon accession | NC_013947 |
Strand | + |
Start bp | 4815591 |
End bp | 4816796 |
Gene Length | 1206 bp |
Protein Length | 401 aa |
Translation table | 11 |
GC content | 73% |
IMG OID | |
Product | isochorismate synthase |
Protein accession | YP_003513253 |
Protein GI | 291301975 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 0.589784 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 18 |
Fosmid unclonability p-value | 0.140007 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTCGACGG TGGCGCCTCG CTTCGCTGAC ACACCCCTTT CACCCCTTTG GAGTGTTCAC ATGCACCTGG TAGACGAGTA CCGCCCCGGA TCCAGCTTCT TCTTCGACAC CGGCAGCCGG TCGCTGTTGA CCCACGGCAG CGCCATCGTG CTGCCCGGCC GGGGCGGCCT GGCCCCGGCG CGGGCCGACA CCGTGCTGCG GGCACTGGGC GGCGACCAGC TGCTGGTCGG CGCGGTTCCG TTCAGCGACA CCGAACCGGC GCAACTGCTC GTCCCGGACG TCTACCGGTG GGGGCCGGGC CTGGCGGGCG CCGAGGCCGC GCCGACGCAC TCGCACGACA CCCCGGCACT GTGCGAACCG CCGCCGCAGC ACTACCGCGA CGCGGTCGCG ACGGCCCTGG CCGACATCGA CGCCACCGAA CTGTCGAAAG TGGTGCTGGC CCGCAGTCTG CGCATCGGCC TGGACGCCCC GGTCGACATC CCGGCGGTGC TGCGGCAGTT GCGGCACCGG CAGCGGCGCG GTTACGTGTT CGCCTGCCCG CTGCCCGAGC AGCGCGACCT GGTGGGCGGC AGCCCGGAAC TGTTGGTGTC GCGCAACGGG GACGTCGTCA CCGCGCATCC GTTGGCCGGG TCCCGGCCGC GCTCGGGTGA CCCCCGGGTG GACACGGCGC GCGGCGCCGA ACTGCTCGCG TCCGAAAAGG ACCGTCGCGA GCACGCGGTG GTCGTCGACG CCATCGCCCG GTCGCTGGAC CCGTACTGCG CCGAGCTTTC GGCGCCCTCG ACACCCGAGA TCGTGTCCAC CGGGCACATG CTGCACCTGG GCACCCGCGT CACCGGCAGG CTGCGCGACC CGCTGCCGTC CGCGCTGAGC CTGGCCGCCG CGCTGCACCC GACCCCGGCC GTGTGCGGCA CCCCGACCGC CACCGCCCGC GAGGCCATCG CCCGGCTGGA GGGCTTCGAC CGGGGCTTCT ACTCCGGGAT GGTCGGCTGG TGCGACTCTG CGGGCAACGG CGAATGGGCC GTGACCATCC GCTGCGCCGA GATCGGCGCG CGCGACGTCC GGCTGTTCGC CGGGGCGGGC ATCGTCGCCG GTTCCGATCC GGCCGCCGAA CTCGCCGAGA CCGAGGCCAA ACTCCAGACC ATGCTCAGCG CGCTGGGCCA CACCGGAAAG GTCGTCGATG AACGCGCCGT TCACGCCATG GCCTGA
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Protein sequence | MSTVAPRFAD TPLSPLWSVH MHLVDEYRPG SSFFFDTGSR SLLTHGSAIV LPGRGGLAPA RADTVLRALG GDQLLVGAVP FSDTEPAQLL VPDVYRWGPG LAGAEAAPTH SHDTPALCEP PPQHYRDAVA TALADIDATE LSKVVLARSL RIGLDAPVDI PAVLRQLRHR QRRGYVFACP LPEQRDLVGG SPELLVSRNG DVVTAHPLAG SRPRSGDPRV DTARGAELLA SEKDRREHAV VVDAIARSLD PYCAELSAPS TPEIVSTGHM LHLGTRVTGR LRDPLPSALS LAAALHPTPA VCGTPTATAR EAIARLEGFD RGFYSGMVGW CDSAGNGEWA VTIRCAEIGA RDVRLFAGAG IVAGSDPAAE LAETEAKLQT MLSALGHTGK VVDERAVHAM A
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