Gene Snas_4515 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSnas_4515 
Symbol 
ID8885720 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStackebrandtia nassauensis DSM 44728 
KingdomBacteria 
Replicon accessionNC_013947 
Strand
Start bp4815591 
End bp4816796 
Gene Length1206 bp 
Protein Length401 aa 
Translation table11 
GC content73% 
IMG OID 
Productisochorismate synthase 
Protein accessionYP_003513253 
Protein GI291301975 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.589784 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value0.140007 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCGACGG TGGCGCCTCG CTTCGCTGAC ACACCCCTTT CACCCCTTTG GAGTGTTCAC 
ATGCACCTGG TAGACGAGTA CCGCCCCGGA TCCAGCTTCT TCTTCGACAC CGGCAGCCGG
TCGCTGTTGA CCCACGGCAG CGCCATCGTG CTGCCCGGCC GGGGCGGCCT GGCCCCGGCG
CGGGCCGACA CCGTGCTGCG GGCACTGGGC GGCGACCAGC TGCTGGTCGG CGCGGTTCCG
TTCAGCGACA CCGAACCGGC GCAACTGCTC GTCCCGGACG TCTACCGGTG GGGGCCGGGC
CTGGCGGGCG CCGAGGCCGC GCCGACGCAC TCGCACGACA CCCCGGCACT GTGCGAACCG
CCGCCGCAGC ACTACCGCGA CGCGGTCGCG ACGGCCCTGG CCGACATCGA CGCCACCGAA
CTGTCGAAAG TGGTGCTGGC CCGCAGTCTG CGCATCGGCC TGGACGCCCC GGTCGACATC
CCGGCGGTGC TGCGGCAGTT GCGGCACCGG CAGCGGCGCG GTTACGTGTT CGCCTGCCCG
CTGCCCGAGC AGCGCGACCT GGTGGGCGGC AGCCCGGAAC TGTTGGTGTC GCGCAACGGG
GACGTCGTCA CCGCGCATCC GTTGGCCGGG TCCCGGCCGC GCTCGGGTGA CCCCCGGGTG
GACACGGCGC GCGGCGCCGA ACTGCTCGCG TCCGAAAAGG ACCGTCGCGA GCACGCGGTG
GTCGTCGACG CCATCGCCCG GTCGCTGGAC CCGTACTGCG CCGAGCTTTC GGCGCCCTCG
ACACCCGAGA TCGTGTCCAC CGGGCACATG CTGCACCTGG GCACCCGCGT CACCGGCAGG
CTGCGCGACC CGCTGCCGTC CGCGCTGAGC CTGGCCGCCG CGCTGCACCC GACCCCGGCC
GTGTGCGGCA CCCCGACCGC CACCGCCCGC GAGGCCATCG CCCGGCTGGA GGGCTTCGAC
CGGGGCTTCT ACTCCGGGAT GGTCGGCTGG TGCGACTCTG CGGGCAACGG CGAATGGGCC
GTGACCATCC GCTGCGCCGA GATCGGCGCG CGCGACGTCC GGCTGTTCGC CGGGGCGGGC
ATCGTCGCCG GTTCCGATCC GGCCGCCGAA CTCGCCGAGA CCGAGGCCAA ACTCCAGACC
ATGCTCAGCG CGCTGGGCCA CACCGGAAAG GTCGTCGATG AACGCGCCGT TCACGCCATG
GCCTGA
 
Protein sequence
MSTVAPRFAD TPLSPLWSVH MHLVDEYRPG SSFFFDTGSR SLLTHGSAIV LPGRGGLAPA 
RADTVLRALG GDQLLVGAVP FSDTEPAQLL VPDVYRWGPG LAGAEAAPTH SHDTPALCEP
PPQHYRDAVA TALADIDATE LSKVVLARSL RIGLDAPVDI PAVLRQLRHR QRRGYVFACP
LPEQRDLVGG SPELLVSRNG DVVTAHPLAG SRPRSGDPRV DTARGAELLA SEKDRREHAV
VVDAIARSLD PYCAELSAPS TPEIVSTGHM LHLGTRVTGR LRDPLPSALS LAAALHPTPA
VCGTPTATAR EAIARLEGFD RGFYSGMVGW CDSAGNGEWA VTIRCAEIGA RDVRLFAGAG
IVAGSDPAAE LAETEAKLQT MLSALGHTGK VVDERAVHAM A