Gene Snas_4500 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSnas_4500 
Symbol 
ID8885705 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStackebrandtia nassauensis DSM 44728 
KingdomBacteria 
Replicon accessionNC_013947 
Strand
Start bp4800849 
End bp4801697 
Gene Length849 bp 
Protein Length282 aa 
Translation table11 
GC content69% 
IMG OID 
Producthypothetical protein 
Protein accessionYP_003513238 
Protein GI291301960 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value0.00701907 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
GTGACACCTA CTGACGGACT TCCGGACCTG CGTTCGCCGG TGCTCGTCGC CGCGTTCACC 
GGCTGGAATG ACGCGGCCGA CGCCGCGAGC CACGTCATCG CGCACCTCAG CGAACAATGG
CAGGCCGAGC ACACGGCCAC CATCGACCCC GATCCGTACT ACGACTTCCA GATGGCGCGC
CCGTCGGTCA AGGTGACCGC CGAGGGCGTG GAGCGGGTCG ACTGGCCGTA CACCGGTTTC
TCGGTGGCCT CGCCCACCGA CGCCGACCGC GACGTCGTGC TGCTGACCGG TGCCGAGCCG
AGCATGCACT GGCGCGGTTT CTGCGCCGAG GTCGCCGAGA TCTGTCACAG TCTCGGCGTC
GAGCAGGTGA TCCTGCTGGG GTCGCTGATG GCCGACGTCG GTTACACCCG GCCGCTGCCG
GTCTCGGGCA CCACCAACGA TCCGGCGCTG GCCAAACGCA TGAAGATGGA CCCGGTGGAC
TACGAGGGTC CCGCGGGCAT CATCGCGGTG TTGCAGGCGA CCTTCCAGGA GGCCGGGGTC
CCGGTCACGT CCTGCTGGGT GCACGTGCCG CACTACGCGG CCACCTCGCC GTGCCCGAAG
GCGACGCTGG GGCTGTTGCA CCGGGTGGAG GAGCTGCTGG ACCTGCCGGT GCCCGCCGGT
GGCCTGGTCG AGCAGACCGC GCAGTGGGAG AACGACGTCA CCCAGCTGGT CGAGGCCGAC
AGCGACATCG CCGACTACAT CAGCTCGCTG GACGAGCCGC AGGCTGGCGA CGAGCCGTCC
GGCGACGACA TCGCCAAGGA CTTCGAGCGC TACCTGCGTA GACGCGGCCC GCACACCGAC
GACAACTGA
 
Protein sequence
MTPTDGLPDL RSPVLVAAFT GWNDAADAAS HVIAHLSEQW QAEHTATIDP DPYYDFQMAR 
PSVKVTAEGV ERVDWPYTGF SVASPTDADR DVVLLTGAEP SMHWRGFCAE VAEICHSLGV
EQVILLGSLM ADVGYTRPLP VSGTTNDPAL AKRMKMDPVD YEGPAGIIAV LQATFQEAGV
PVTSCWVHVP HYAATSPCPK ATLGLLHRVE ELLDLPVPAG GLVEQTAQWE NDVTQLVEAD
SDIADYISSL DEPQAGDEPS GDDIAKDFER YLRRRGPHTD DN