Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Snas_4484 |
Symbol | |
ID | 8885689 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Stackebrandtia nassauensis DSM 44728 |
Kingdom | Bacteria |
Replicon accession | NC_013947 |
Strand | + |
Start bp | 4784727 |
End bp | 4786160 |
Gene Length | 1434 bp |
Protein Length | 477 aa |
Translation table | 11 |
GC content | 70% |
IMG OID | |
Product | BAAT/Acyl-CoA thioester hydrolase |
Protein accession | YP_003513222 |
Protein GI | 291301944 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 0.061544 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 15 |
Fosmid unclonability p-value | 0.0537303 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | GTGACCAAAG CGAAGCTCGG CTGGGTGGCG CTGCTGCCCG GGCAGGACGG GCTTATCCGG ATCAATCTGC CCGCCGACGC GAAGCAGGCG ACCTTCGACC TTCCCGCACG ACTTCAATTT GGACGCGAGC TGCATCCGGT GCTGCCCTTC GACATCGAGG CCTGGCGGTC GCGGGTCGGC GAGTACACCG ACGGCGACAT CAAGCTCGTC GTCACCATGA ACCCCGACTC CGGGCTGGCC GAGCCGTTCC CGTTCTATGT CGACCTCGAC CACGACGCCG TGGTTCCGTT GACGCCCATC GCCGCCGACC GGCTGCTGTC CGAACAGGGC GAGGAGATCA CCTTCACCGC CGACGGTGAA CTGCGCATCG CCATCGAGGG CGCCGAGGCC ACACTGCGGC GCGCCGAGGT ACCGGTCGAG GAGGAGGTCA GTTTCCTGGT CTCCGGTGAG GCCACCGTCG TTGCGGGCAC GCTGCTGCGT CCGGCGGGCG AGGGCCCGTT CCCGGCGGCG GTGCTGGTGC ACGGTTCCTC GTTCCACCAG CGCGACTTCT ATCGCATGTG GGCCCACGCC CTGGTTCGCG CCGGGGTGGC CGCGCTGATC TTCGACCGGC AGGGCCACGG CGCCTCCACC GGCGAGGTCG CCGAGACCCT CCAGGACCGG GCCGCCGGGG TCGAGGCGGC GATGAACTTC CTCAAGGAAC ACAAGGCCGT CTCCGAGGTG GGCCTGTGGG GCATCAGCAA CGGCATGTGG ACGGTGCCGC TGGTGGCCGC GCGGCGTCCC GACGTCGCGT TCGTCGCGGG CGTCTCGGCC CCCGGCGTCA CCGCCGCCGA ATCGGAGGCG CACCGCCGTG GCACCGCGCT GCGGCAGGGC GGCGTGTCCG CCGAGGCCGC CGGGATCGCC GAGAAGATCT GGCGGCTGCT GGCCGAGGTG AGCCAGACCG GCGACGCCTC ACCGTCCCAG GTCCGCAAGC TCGAACCGCT GCTGAAGAAG CTGCGCGCCG ACAAGACGGT CAAGGCGTAC ACTCCGCCCG GCTACGCCAA GACCAGCCCG AAGCTGTCCC CCATGCCCCC GTCCGGTTCG GCCGCCGAGG TGGCCAAGGC GCACGCGGGC ACCCCCGATC CGTCCGTGGG CTACGACCCG GCCAACAGCT ACCGCGAGAT CTCCTGCCCG GTGCTGCTGC AGTACGGCAC CGACGACCCC AACCTCCCCG CGGCCGAGTC CGAGAAACGC ATCCGCGACG CCCTCACCGA CGGCGGCAAC GAGAACTTCA CCATCACCAG CTACCCGAAC GCCGGGCACC TGCTGGAACG GGTGCCATCC GAAGTAGACG GCATGACCCA CGAGGAGGCC TCGTACGGGT TGCATGGTCT GCGGTTCGCG TCCGGCGCCG TGTCGGAGTT CATCTCGTGG TTCGAGGCCC GCAAGCCCTC ATGA
|
Protein sequence | MTKAKLGWVA LLPGQDGLIR INLPADAKQA TFDLPARLQF GRELHPVLPF DIEAWRSRVG EYTDGDIKLV VTMNPDSGLA EPFPFYVDLD HDAVVPLTPI AADRLLSEQG EEITFTADGE LRIAIEGAEA TLRRAEVPVE EEVSFLVSGE ATVVAGTLLR PAGEGPFPAA VLVHGSSFHQ RDFYRMWAHA LVRAGVAALI FDRQGHGAST GEVAETLQDR AAGVEAAMNF LKEHKAVSEV GLWGISNGMW TVPLVAARRP DVAFVAGVSA PGVTAAESEA HRRGTALRQG GVSAEAAGIA EKIWRLLAEV SQTGDASPSQ VRKLEPLLKK LRADKTVKAY TPPGYAKTSP KLSPMPPSGS AAEVAKAHAG TPDPSVGYDP ANSYREISCP VLLQYGTDDP NLPAAESEKR IRDALTDGGN ENFTITSYPN AGHLLERVPS EVDGMTHEEA SYGLHGLRFA SGAVSEFISW FEARKPS
|
| |