Gene Snas_4480 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSnas_4480 
Symbol 
ID8885685 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStackebrandtia nassauensis DSM 44728 
KingdomBacteria 
Replicon accessionNC_013947 
Strand
Start bp4776879 
End bp4777649 
Gene Length771 bp 
Protein Length256 aa 
Translation table11 
GC content69% 
IMG OID 
ProductABC transporter related protein 
Protein accessionYP_003513218 
Protein GI291301940 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.269764 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones22 
Fosmid unclonability p-value0.77881 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGACCACAA CGACAACCGC CGCCGCGCGG GCGCACAACG TCTGGAAGGT GTACGGCACC 
GGTGAGGCGC AGGTCATCGC GTTGCACGGC GTCAGCGCGG AGTTCGGCGC CGGACAGTTC
ACGGCGATCA TGGGCCCCTC GGGGTCGGGT AAGTCGACGC TCATGCACTG CCTGGCCGGC
CTCGACCACA CCAACCGGGG CGAGGTCCAC ATCGGCGACA CGAAGGTCAC CGGCCTGTCC
GACCGGGGGC TGACGAAACT GCGCCGCCAG AAGGTCGGCT TCATCTTCCA GCAGTTCAAC
CTGCTGCCGA CGCTGACCGC ACAGGAGAAC ATCCTGCTGC CGCTGTCCAT CGCGAAGCAG
AAGCCCGACG CGGCCTGGTT CGACCGGGTC ATCGACACCG TCGGACTGCG CGACCGGCTG
TCCCACCGGC CCTCGCAGCT GTCGGGCGGC CAGCAGCAGC GCGTCGCGTG CGCCCGGGCG
CTGGTGCAGC GGCCCGAGGT GATCTTCGCC GACGAGCCCA CCGGAAACCT GGACTCCCGT
TCGGGCACCG AGGTGCTGAA GTTCCTGCGC GACTCGGTCG ACCAGTTCGG ACAGACCATT
GTGATGGTCA CGCACGACCC GGTCGCGGCG TCCTACGCCG ACCGGGTGCT GTTCCTGGCC
GACGGCCGGG TGGTGGACGA GATGCTCGAA CCCACCGCCG ACCGGGTGCT GGACGAACTG
AAGCGCTTCG AGGAGATCGT CGACTCGGTC AAGGCCGGGG AGGCTCGCTA G
 
Protein sequence
MTTTTTAAAR AHNVWKVYGT GEAQVIALHG VSAEFGAGQF TAIMGPSGSG KSTLMHCLAG 
LDHTNRGEVH IGDTKVTGLS DRGLTKLRRQ KVGFIFQQFN LLPTLTAQEN ILLPLSIAKQ
KPDAAWFDRV IDTVGLRDRL SHRPSQLSGG QQQRVACARA LVQRPEVIFA DEPTGNLDSR
SGTEVLKFLR DSVDQFGQTI VMVTHDPVAA SYADRVLFLA DGRVVDEMLE PTADRVLDEL
KRFEEIVDSV KAGEAR