Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Snas_4480 |
Symbol | |
ID | 8885685 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Stackebrandtia nassauensis DSM 44728 |
Kingdom | Bacteria |
Replicon accession | NC_013947 |
Strand | + |
Start bp | 4776879 |
End bp | 4777649 |
Gene Length | 771 bp |
Protein Length | 256 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | |
Product | ABC transporter related protein |
Protein accession | YP_003513218 |
Protein GI | 291301940 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 0.269764 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 22 |
Fosmid unclonability p-value | 0.77881 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | TTGACCACAA CGACAACCGC CGCCGCGCGG GCGCACAACG TCTGGAAGGT GTACGGCACC GGTGAGGCGC AGGTCATCGC GTTGCACGGC GTCAGCGCGG AGTTCGGCGC CGGACAGTTC ACGGCGATCA TGGGCCCCTC GGGGTCGGGT AAGTCGACGC TCATGCACTG CCTGGCCGGC CTCGACCACA CCAACCGGGG CGAGGTCCAC ATCGGCGACA CGAAGGTCAC CGGCCTGTCC GACCGGGGGC TGACGAAACT GCGCCGCCAG AAGGTCGGCT TCATCTTCCA GCAGTTCAAC CTGCTGCCGA CGCTGACCGC ACAGGAGAAC ATCCTGCTGC CGCTGTCCAT CGCGAAGCAG AAGCCCGACG CGGCCTGGTT CGACCGGGTC ATCGACACCG TCGGACTGCG CGACCGGCTG TCCCACCGGC CCTCGCAGCT GTCGGGCGGC CAGCAGCAGC GCGTCGCGTG CGCCCGGGCG CTGGTGCAGC GGCCCGAGGT GATCTTCGCC GACGAGCCCA CCGGAAACCT GGACTCCCGT TCGGGCACCG AGGTGCTGAA GTTCCTGCGC GACTCGGTCG ACCAGTTCGG ACAGACCATT GTGATGGTCA CGCACGACCC GGTCGCGGCG TCCTACGCCG ACCGGGTGCT GTTCCTGGCC GACGGCCGGG TGGTGGACGA GATGCTCGAA CCCACCGCCG ACCGGGTGCT GGACGAACTG AAGCGCTTCG AGGAGATCGT CGACTCGGTC AAGGCCGGGG AGGCTCGCTA G
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Protein sequence | MTTTTTAAAR AHNVWKVYGT GEAQVIALHG VSAEFGAGQF TAIMGPSGSG KSTLMHCLAG LDHTNRGEVH IGDTKVTGLS DRGLTKLRRQ KVGFIFQQFN LLPTLTAQEN ILLPLSIAKQ KPDAAWFDRV IDTVGLRDRL SHRPSQLSGG QQQRVACARA LVQRPEVIFA DEPTGNLDSR SGTEVLKFLR DSVDQFGQTI VMVTHDPVAA SYADRVLFLA DGRVVDEMLE PTADRVLDEL KRFEEIVDSV KAGEAR
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