Gene Snas_4449 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSnas_4449 
Symbol 
ID8885654 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStackebrandtia nassauensis DSM 44728 
KingdomBacteria 
Replicon accessionNC_013947 
Strand
Start bp4748339 
End bp4749526 
Gene Length1188 bp 
Protein Length395 aa 
Translation table11 
GC content68% 
IMG OID 
Producthypothetical protein 
Protein accessionYP_003513187 
Protein GI291301909 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones20 
Fosmid unclonability p-value0.317252 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCATTTC AGGAGCTCGA CGGTAACGGC GCACCGATCC GGCTGTGGGC CGACCCGGCG 
TCGATAGAGG AGCAGGCACT GGCGCAGCTG CGCAACGTCG CGGCGCTGCC GTGGGTGTCG
GGCGTGGCGG TCATGCCGGA CGTCCACTAT GGCAAGGGCG CGACGGTGGG TTCGGTCATC
GCGATGCGCG GGGCGGTCTC GCCCGCGGCG GTGGGCGTCG ACATCGGATG CGGGATGACG
GCGCAGCGGA CCTCGCTGAC GGCCGAGGAC CTGCCCGAGG ACCTGTCACG GCTGCGCGGC
GCCATCGAGA AGGCGATTCC GGTGGGGCGC GGCATGCACA AGCGCTCGGT GGACGTCGAC
CATCTGAAGA CGGGTTTCCG GGGCTGGCAC CGGTTCTGGG GCGAGTTCGA CGAGCTGGCC
AAGCCGGTGG CGCGGTCGCT CAAGGGCCGG TCGATGCAGC AGCTGGGGAC GCTCGGCGGC
GGGAATCACT TCATCGAAGT TTGCCTGTCT GACGATGGGC AGGTGTGGCT GATGCTGCAC
TCGGGTTCGC GCAACGTCGG CAACAAGCTG GCCGAGTTCC ACATCGAGAA GGCCAAGGCG
CTGCCGCACA ACGCCGACCT GCCGGATCCG GACCTGGCCG TGTTCGTCAA CGACACGCCC
ACTATGGACG CGTATCGGCG GGACCTGTTC TGGGCGCAGG AGTACGCGCG CCGCAACCGG
GCCGTCATGA TGGCGCTGCT GCGCGAGGTC GTCCGCAAGA AGTTCAAGAA GGTGAGCTTC
GACGAGGAGA TCTCCTGCCA CCACAACTAC GTGGCCGAGG AGGTCCACGA CGGGCACGAG
GTGCTGGTGA CCCGCAAGGG CGCCATTCAC GCCGGAGCCG GACGGATGGG CATCATCCCG
GGGTCGATGG GCGCCTCGTC GTTCATCGTG CGCGGGCTGG GCAACGCCGA CGCCTTCGAG
TCGGCCTCGC ACGGCGCCGG ACGTCGGATG AGCCGCAACC AGGCGCGGAA GCGGTTCACC
GCCGAGGACC TGGTCGCGCA GACCGCGGGC GTCGAGTGCC GCAAGGACTC CGGGGTGGTC
GACGAGATCC CCAGCGCCTA CAAGGACATC GACGAGGTCA TCGCGGCCCA GTCGGATCTG
GTCGAGGTGA CCGCACGGCT CAAGCAGGTC ATCTGCGTGA AGGGCTAG
 
Protein sequence
MSFQELDGNG APIRLWADPA SIEEQALAQL RNVAALPWVS GVAVMPDVHY GKGATVGSVI 
AMRGAVSPAA VGVDIGCGMT AQRTSLTAED LPEDLSRLRG AIEKAIPVGR GMHKRSVDVD
HLKTGFRGWH RFWGEFDELA KPVARSLKGR SMQQLGTLGG GNHFIEVCLS DDGQVWLMLH
SGSRNVGNKL AEFHIEKAKA LPHNADLPDP DLAVFVNDTP TMDAYRRDLF WAQEYARRNR
AVMMALLREV VRKKFKKVSF DEEISCHHNY VAEEVHDGHE VLVTRKGAIH AGAGRMGIIP
GSMGASSFIV RGLGNADAFE SASHGAGRRM SRNQARKRFT AEDLVAQTAG VECRKDSGVV
DEIPSAYKDI DEVIAAQSDL VEVTARLKQV ICVKG