Gene Snas_4425 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSnas_4425 
Symbol 
ID8885627 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStackebrandtia nassauensis DSM 44728 
KingdomBacteria 
Replicon accessionNC_013947 
Strand
Start bp4718425 
End bp4719159 
Gene Length735 bp 
Protein Length244 aa 
Translation table11 
GC content69% 
IMG OID 
Productpseudouridine synthase 
Protein accessionYP_003513163 
Protein GI291301885 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.223617 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones30 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCGCTG AACCCGAAGG CGTACGCCTG CAGAAGGTGA TGGCGGCCGC CGGGATCGGT 
TCCCGCCGCG CCTGCGAGAA CCTGATCGCC GCCGGGCGGG TCACCGTCAA CGGCAAGAAG
GCCCAACTGG GCAACCGGGT CGACCCGCAG CACGCCGTCA TCCACGTCGA CGGTGAACGC
GTCATCACCG ACACCAAGCT GGTGCACTTC GCGCTCAACA AGCCCCGGGG CTACGTGTCC
ACGATGGATG ACGAGCTGAA GCGCCCCGAC CTCAACGAGT TCACCGCCGG GATCAGCGAA
CGCGTCTTCC ACGTCGGCCG CCTCGACACC GAATCCGAGG GCCTGCTGCT GCTCACCAAC
GACGGTGAGC TGGGCAACCG GCTCACCCAC CCGTCCTACG AGATCGCCAA GACCTACCGC
TGCCAGGTCA CCGGTTACGC CGGGCCCGCC ATCGCCCGGC GGCTCGCGGC CGGGGTCGTG
CTCGAGGACG GACCGGTCAC CGTCGACGAC TTCAAGGTCA TCGACGAGCA CGCCGACCAG
GCGCTGGTCG AGATCGTCGT GCACGAGGGC CGCAAGCACG TCGTGCGGCG GCTGCTGGCC
GAGGTGGGAC TGCCGGTCAA CCGGCTGGTG CGCACCGCGA TCGGCGACAT CCGGCTGGCC
AACCTGAAAC CCGGGACGTT GCGTAAACTC CGCCCCGACG AGATCGCCTC CCTCTACCGC
ACCGTGGGCC TGTGA
 
Protein sequence
MTAEPEGVRL QKVMAAAGIG SRRACENLIA AGRVTVNGKK AQLGNRVDPQ HAVIHVDGER 
VITDTKLVHF ALNKPRGYVS TMDDELKRPD LNEFTAGISE RVFHVGRLDT ESEGLLLLTN
DGELGNRLTH PSYEIAKTYR CQVTGYAGPA IARRLAAGVV LEDGPVTVDD FKVIDEHADQ
ALVEIVVHEG RKHVVRRLLA EVGLPVNRLV RTAIGDIRLA NLKPGTLRKL RPDEIASLYR
TVGL