Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Snas_4425 |
Symbol | |
ID | 8885627 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Stackebrandtia nassauensis DSM 44728 |
Kingdom | Bacteria |
Replicon accession | NC_013947 |
Strand | - |
Start bp | 4718425 |
End bp | 4719159 |
Gene Length | 735 bp |
Protein Length | 244 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | |
Product | pseudouridine synthase |
Protein accession | YP_003513163 |
Protein GI | 291301885 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 0.223617 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 30 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACCGCTG AACCCGAAGG CGTACGCCTG CAGAAGGTGA TGGCGGCCGC CGGGATCGGT TCCCGCCGCG CCTGCGAGAA CCTGATCGCC GCCGGGCGGG TCACCGTCAA CGGCAAGAAG GCCCAACTGG GCAACCGGGT CGACCCGCAG CACGCCGTCA TCCACGTCGA CGGTGAACGC GTCATCACCG ACACCAAGCT GGTGCACTTC GCGCTCAACA AGCCCCGGGG CTACGTGTCC ACGATGGATG ACGAGCTGAA GCGCCCCGAC CTCAACGAGT TCACCGCCGG GATCAGCGAA CGCGTCTTCC ACGTCGGCCG CCTCGACACC GAATCCGAGG GCCTGCTGCT GCTCACCAAC GACGGTGAGC TGGGCAACCG GCTCACCCAC CCGTCCTACG AGATCGCCAA GACCTACCGC TGCCAGGTCA CCGGTTACGC CGGGCCCGCC ATCGCCCGGC GGCTCGCGGC CGGGGTCGTG CTCGAGGACG GACCGGTCAC CGTCGACGAC TTCAAGGTCA TCGACGAGCA CGCCGACCAG GCGCTGGTCG AGATCGTCGT GCACGAGGGC CGCAAGCACG TCGTGCGGCG GCTGCTGGCC GAGGTGGGAC TGCCGGTCAA CCGGCTGGTG CGCACCGCGA TCGGCGACAT CCGGCTGGCC AACCTGAAAC CCGGGACGTT GCGTAAACTC CGCCCCGACG AGATCGCCTC CCTCTACCGC ACCGTGGGCC TGTGA
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Protein sequence | MTAEPEGVRL QKVMAAAGIG SRRACENLIA AGRVTVNGKK AQLGNRVDPQ HAVIHVDGER VITDTKLVHF ALNKPRGYVS TMDDELKRPD LNEFTAGISE RVFHVGRLDT ESEGLLLLTN DGELGNRLTH PSYEIAKTYR CQVTGYAGPA IARRLAAGVV LEDGPVTVDD FKVIDEHADQ ALVEIVVHEG RKHVVRRLLA EVGLPVNRLV RTAIGDIRLA NLKPGTLRKL RPDEIASLYR TVGL
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