Gene Snas_4399 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSnas_4399 
Symbol 
ID8885600 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStackebrandtia nassauensis DSM 44728 
KingdomBacteria 
Replicon accessionNC_013947 
Strand
Start bp4692324 
End bp4693136 
Gene Length813 bp 
Protein Length270 aa 
Translation table11 
GC content68% 
IMG OID 
ProductSpoOM family protein 
Protein accessionYP_003513138 
Protein GI291301860 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.183195 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones53 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCCCGT GCGGTCTGTC CCCATCGAAC GAAAGGAATC ACACAGTCGT GATCCGTAAA 
CTCACCTCCG GCGTCGGCGC GGGCGTAACC GTCGACACCG TCCTGACCGA TTCCCATGTC
ACGCCCGGCG GTGTCCTGCG GGGCGAGGTC CTGTTCAACG GCGGCGAGCG CGACTGTGAG
GTCGAGGGCA TCGCCCTGGA CTTCACCGCG GTGGTCGAGG CCGAGGACGA GGGCGACGAG
CAGGTCGAAT ACGACTTCCA CGGTGCCGAC GTGTGCGAAC CCTTCCTGCT GGAGGCGGGG
GTCGAATACG CCGTCGAGTT CGACGTCGAG GTGCCGTGGG AGACGCCGAT CAGCACCGTC
GGAGGGCTGG TGCTGCCGGG CCTGGAACTG GGGGTGGCCA CCGCGCTGCA ACTGGAGGGC
GGGGTCGACA AGGGCGACCT GGACGACCTG CGTGTGGAGC CGCTGCCCGG GCACGTCGCG
GTCATCGAGG CGCTGGAGCG GCTGGGCTTC GAGTTCCAGC GCTCCGACCT GGAGGAGGGC
ACACTGGACG GTTCGACGCT GCCGTTCTAC CAGGAGATCG AGTTTCGTCC CGGCGGCGAG
TTCGCCGGTG CCTTCAGCGC CCTGGAGCTG ACCTTCGTCA CCGGCCGCGA CGACACCCGG
GTGCTGATCG AGGTCGACAA GCGCGGCGGT TTCCTCACCG AGGGCGGCGA CGACTACCAG
CAGTTCACCA TCGCCACCTT CGAGGCCGGT GACCTGCTCG CGGCGCTGCG CGAGGAACTG
CGTCAGTTGA GCGAACGTCG CGGACTGTTC TAA
 
Protein sequence
MTPCGLSPSN ERNHTVVIRK LTSGVGAGVT VDTVLTDSHV TPGGVLRGEV LFNGGERDCE 
VEGIALDFTA VVEAEDEGDE QVEYDFHGAD VCEPFLLEAG VEYAVEFDVE VPWETPISTV
GGLVLPGLEL GVATALQLEG GVDKGDLDDL RVEPLPGHVA VIEALERLGF EFQRSDLEEG
TLDGSTLPFY QEIEFRPGGE FAGAFSALEL TFVTGRDDTR VLIEVDKRGG FLTEGGDDYQ
QFTIATFEAG DLLAALREEL RQLSERRGLF