Gene Snas_4393 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSnas_4393 
Symbol 
ID8885594 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStackebrandtia nassauensis DSM 44728 
KingdomBacteria 
Replicon accessionNC_013947 
Strand
Start bp4685246 
End bp4687297 
Gene Length2052 bp 
Protein Length683 aa 
Translation table11 
GC content72% 
IMG OID 
ProductNADH:flavin oxidoreductase/NADH oxidase 
Protein accessionYP_003513133 
Protein GI291301855 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones46 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACAGCCG GTTACCCGCA CCTGTTGGCC CCGCTGGAGC TGGGTGGCAC CCGGCTGCGC 
AACCGGGTCG TCATGGGCTC GATGCACACC GGCCTGGAGG ACAAGGCCAG GGACCTGCCG
AAGCTGGCGG CCTACTTCGC CGAGCGCGCC AAGGGCGGCA CCGGCCTGAT GATCACCGGC
GGTTTCGCGC CCAACAAGGT GGGACGGCTG GCGCCGTTCG GCTCCGACCT CACCTCCACC
CGCGCCGCCG ACGCCCACCG GGTCGTCACC GACGCCGTGC ACGCCGAGGG CGGGGCGATC
GCGTTGCAGA TCCTGCACTC GGGTCGCTAC GGCTACCACC CCTTCACCGT GTCGGCCTCC
AACCGCAAGG CCCCCATCAA CCCGTTCAAG CCCAAGCGGC TCAGCGCCGC CGGGGTGGAG
AAGCAGATCG ACGCGTTCGT CCGCTGCGCG AAACTGGCGC GCCGCGCCGG ATACGACGGC
GTCGAGATCA TGGGCTCGGA GGGCTACTTC ATCAACCAGT TCCTGGCCCG GCGCACCAAC
GACCGCGACG ACGCCTGGGG CGGCGACCAC AAGCGCCGGA TGCGGCTGCC GGTCGAGATC
GTCGGGCGGG TGCGCGAGGC CGTCGGCGAC GACTTCCTGG TCATCTACCG CACCTCGATG
CTGGAGCTGG TCGAGGACGG CCAGACCTTC GACGAGATCG TCGAACTGGC CCAGGCCGTC
GAGGGCGCCG GGGCGTCGAT CCTCAGCGCC GGGATCGGCT GGCACGAGGC CAAGATCCCC
ACGATCATCA CATCGGTGCC GCGCGCCGCG TTCGCGTGGG CGGCCAAGCG ACTGCGGCCC
CACGTCGGCA TCCCGATCGT GGCGTCCAAC CGGATCAACA CCCCCGAACT GGCCGAGCGG
CTGCTGGCCG AGGGCGTGTG CGACCTGGTG TCGATGGCGC GGCCGCTGCT GGCCGACCCG
CAGTTCGTGG CCAAGGCGCA GCGGGGCGCC GCTGCGGAGA TCAACACCTG CATCGCCTGC
AACCAGGCCT GTCTGGACCA CGCCTTCGCC AACAAGCCGG TCAGCTGCCT GGTGAATCCG
CGCGCGGCCC GCGAGACCCT GGACGCGTAC ACGCCCAAGC CGATCGCGAC CCGCAAACGC
GTCGCGGTGG TGGGCGCCGG ACCCGCGGGG CTGGCCGCCG CCACGACCCT GGCCGACCGG
GGCCACGGCG TGGAGCTGTT CGAGGCGGCC GACGTCATCG GCGGCCAGTT CAACCTCGCC
AAACGCATCC CCGGCAAGCA GGACTTCGCC GACACCATCC GCTACTTCGA GCGGCAGCTG
GAGCGGCTGG GGGTCACGGT CCACCTGTCG ACGCCGGTGA CGGCGGCCCG GCTGATCGAG
GCGGGCTTCG ACGAGGTGGT GCTGGCCACC GGCGTGAACC CGCGCGAGAT CGCGCTGCCC
GCGACCGGCG CTCCCACGGT GCTGTCCTAT GTCGACGTGC TGGCGAACGG CCGCGCGGTC
GGCGACCGGG TCGCGATCGT GGGTGCGGGC GGGATCGGCT TCGACGTGGC CCAGTTCCTC
ACCGAACCGG CCCCGGTCGA GGCCCCCGAC GCCGACGCGA ACCCGGAACT GGGGGCGGAC
TGGCTGGCCG AGTGGGGCGT CACCGAGGCG GCCGACGCTC CCGGCGGCCT CGCCGCCCCG
GCGCCGCAGT CGTCGAAGCG CCAGGTGTAC CTGTTGCAGC GCAAGCAGAC CCGCGTGGGC
GCCGGGCTGG GCAAGACCTC GGGCTGGGCG CATCGGCTGA CACTGAAGCG GCGCGGCGTC
GAGATGATCC CGTCGGTCAC GTACAACAAA GTGGACGACG AGGGCCTGCA TCTGACCGTG
GGTGACGAGC CCCGCGTCCT CGACGTCGAC ACGGTGGTCA TCTGCGCGGG CCAGGAACCC
CGCCGCGACC TCCACGACGA GCTGGTCGCG TCCGGAATCC CGACCCACCT CATCGGCGGA
GCCGACGTCG CGGCCGAGCT CGACGCCAAG CGCGCCATAG ACCAGGCCAC CCGACTCGCC
GTGGGCCTGT AG
 
Protein sequence
MTAGYPHLLA PLELGGTRLR NRVVMGSMHT GLEDKARDLP KLAAYFAERA KGGTGLMITG 
GFAPNKVGRL APFGSDLTST RAADAHRVVT DAVHAEGGAI ALQILHSGRY GYHPFTVSAS
NRKAPINPFK PKRLSAAGVE KQIDAFVRCA KLARRAGYDG VEIMGSEGYF INQFLARRTN
DRDDAWGGDH KRRMRLPVEI VGRVREAVGD DFLVIYRTSM LELVEDGQTF DEIVELAQAV
EGAGASILSA GIGWHEAKIP TIITSVPRAA FAWAAKRLRP HVGIPIVASN RINTPELAER
LLAEGVCDLV SMARPLLADP QFVAKAQRGA AAEINTCIAC NQACLDHAFA NKPVSCLVNP
RAARETLDAY TPKPIATRKR VAVVGAGPAG LAAATTLADR GHGVELFEAA DVIGGQFNLA
KRIPGKQDFA DTIRYFERQL ERLGVTVHLS TPVTAARLIE AGFDEVVLAT GVNPREIALP
ATGAPTVLSY VDVLANGRAV GDRVAIVGAG GIGFDVAQFL TEPAPVEAPD ADANPELGAD
WLAEWGVTEA ADAPGGLAAP APQSSKRQVY LLQRKQTRVG AGLGKTSGWA HRLTLKRRGV
EMIPSVTYNK VDDEGLHLTV GDEPRVLDVD TVVICAGQEP RRDLHDELVA SGIPTHLIGG
ADVAAELDAK RAIDQATRLA VGL