Gene Snas_4364 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSnas_4364 
Symbol 
ID8885565 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStackebrandtia nassauensis DSM 44728 
KingdomBacteria 
Replicon accessionNC_013947 
Strand
Start bp4652818 
End bp4653735 
Gene Length918 bp 
Protein Length305 aa 
Translation table11 
GC content72% 
IMG OID 
ProductD-isomer specific 2-hydroxyacid dehydrogenase NAD-binding protein 
Protein accessionYP_003513104 
Protein GI291301826 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.162861 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value0.0719661 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAGGTCT GGATCCCGCA CGAACACGGT CGCGCCGCCA TGGAACCGAT CCCCGACGGC 
GTTGAGCTGG AGGTCTACGA CGGCGACGGC GACTTCCCGT CCTCGCCGTC GGACGTGGAG
TTCTGGGTGC CGCCGTTCAT GTCCAAACGG GTGTCCAGCG CCCGCCTCGA CCTGATGCCG
GGCCTGAAGG TGATCCAGCT GCTGTCGGCG GGCGCGGACG CCTGGATCGC CGGGGTCGGC
GAATCGGTGA CGCTGTGCGA CGCGATGGGC GTGCACACCG CGGCCACCTC GGAGTGGGCG
GTGTCGGCGA TGCTGGCCTC GCTGCGCGGC TTCGACCGCT ACGCCCGCAA CCAGTCCCGA
CGACTGTGGC AACCGGTGCC CACCGACACC CTCGAGGGCA AACGGGTGCT GATCGTGGGC
GCCGGGGACA TCGGCGCCGC GATCGCGACC AGGGTCGAAG CGTTCGGCGC GCGGCCGGTC
ATGGTGGCGC GGCGGGCCCG GACCGGGGTG CACGCCGTGG CCGAACTGCC ACAACTGCTG
CCGGACGCCG ACATCGTGGT GCTGATCGTC CCGCTGACCG AGGCCACTCG GGGCATGGTG
GACGCGACGT TCCTGGCGGC GATGCCCGAC GGCGCGATGC TGGTCAACGC CGCCCGCGGC
CCGGTCGTGG ACACCGCCGC GCTCACCGAG GAGGTGCGCG GCGGCAGGCT GCGGGCCGCG
CTGGACGTCA CCGACCCGGA GCCACTGCCC GAGGACCACC CTTTGTGGAC TTTGGAGAAC
GTGCTCATCA CGCCGCACGT CGGCGGCGCG GCGGCGGTGC CCGGGTTCCT CGACAAGGGT
TACGCCCTGG TGGGGCGGCA GCTGCGCCGC TACGCGGCGG GGGAGGGGCT CGACAACGTC
GTCAGCGAGG GTTACTGA
 
Protein sequence
MKVWIPHEHG RAAMEPIPDG VELEVYDGDG DFPSSPSDVE FWVPPFMSKR VSSARLDLMP 
GLKVIQLLSA GADAWIAGVG ESVTLCDAMG VHTAATSEWA VSAMLASLRG FDRYARNQSR
RLWQPVPTDT LEGKRVLIVG AGDIGAAIAT RVEAFGARPV MVARRARTGV HAVAELPQLL
PDADIVVLIV PLTEATRGMV DATFLAAMPD GAMLVNAARG PVVDTAALTE EVRGGRLRAA
LDVTDPEPLP EDHPLWTLEN VLITPHVGGA AAVPGFLDKG YALVGRQLRR YAAGEGLDNV
VSEGY