| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Snas_4362 |
|---|
| Symbol | |
|---|
| ID | 8885563 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Stackebrandtia nassauensis DSM 44728 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013947 |
|---|
| Strand | - |
|---|
| Start bp | 4651096 |
|---|
| End bp | 4652196 |
|---|
| Gene Length | 1101 bp |
|---|
| Protein Length | 366 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 71% |
|---|
| IMG OID | |
|---|
| Product | glycosyl hydrolase BNR repeat-containing glycosyl hydrolase |
|---|
| Protein accession | YP_003513102 |
|---|
| Protein GI | 291301824 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 12 |
|---|
| Plasmid unclonability p-value | 0.301498 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 16 |
|---|
| Fosmid unclonability p-value | 0.0749623 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAGTTACC TCATGGCCAT CGGTACCAAG AAAGGGCTGT TCACCGCGAC CAGCGACGAC
CGGGTCAACT GGGACGTCAC GGGGCCGCAC CGGCTGGGTG GGGACGCCAG CACGGTGCAG
ACCGGGGTCT ACGCCATCGG CATCGACACC CGTCGCGACA CCCCGCGCCT GTTCGTGGGC
GCCGACAGCT CGCATTTCGG TCCCAGCGTC TGGCATTCCG ACGACGCCGG GGCGACCTGG
AGCGAACCGG CCGACGCGCC GCCGATCGCG TTGCCGGAGG ACACCGACAC CGCCTTCGCG
CGGGCCTGGC AGTTCGGGTT CGGGCCCGAA CCCGACGTCG TGTTCGCCTC GGGGGAACCG
CACAGCCTGT TCAAGTCCAC CGACGGTGGC GTGACCTTCG AGCTCAACCG GGGACTGTGG
GACCATCCAC ACCGGACCGA ATGGTTCCCG GGCTTCGGCG GCGCGGCGAT CCACACGATC
ATGCCGCACC CGACCGACCC GGCGAAGATG TCGGTGGCGA TGTCCACCGG CGGCTTCTAC
CAGACCGAGG ACGGCGGCGC GTCCTGGAAC CCGACCTGCC AGGGCATCCG CGCCGACTTC
TTCCCGGAGC CGTACCCGGA GTTCGGGCAG TGCGTCCACA AGGCGGTGCG CGCCGCGGGC
GACCCGTCCC GGTTCTACCT GCAGAACCAC GGCGGGGTCT ACCGCAGTGA CGACGGCGGC
CACAAGTGGA ACTCCATCGC GGAGGGGCTG CCGTGCGACT TCGGCTTCGC GATGGTCGCC
CACCCGCACC GCACCGACTC GGTGCTGAGC TTCCCGGTGC ACGCCGACGC CAACCGGTTC
CTGCCGGACA ACCGGCTCCA GGTGCACCGC AGCGACGACG GGGGCTCGAC CTGGCGCGAG
GTCAGCCAGG GGCTGCCCAC CGAGCCGTAC TTCGGCATCG TGCTGCGCGA CGCGGCGGCC
ACCGACGCCG CCGAGGTGCC CGGCTACTAC TTCGGCACCC GCTGCGGCGA CGTCTTCGTC
TCCACGGAGG ACTCCGAGAA CTGGGTCCAG GCCGCCTCGC ACCTGCCGGA CGTGCTGTGC
GTGCGCGCCG CCCGGATGTG A
|
|---|
| Protein sequence | MSYLMAIGTK KGLFTATSDD RVNWDVTGPH RLGGDASTVQ TGVYAIGIDT RRDTPRLFVG
ADSSHFGPSV WHSDDAGATW SEPADAPPIA LPEDTDTAFA RAWQFGFGPE PDVVFASGEP
HSLFKSTDGG VTFELNRGLW DHPHRTEWFP GFGGAAIHTI MPHPTDPAKM SVAMSTGGFY
QTEDGGASWN PTCQGIRADF FPEPYPEFGQ CVHKAVRAAG DPSRFYLQNH GGVYRSDDGG
HKWNSIAEGL PCDFGFAMVA HPHRTDSVLS FPVHADANRF LPDNRLQVHR SDDGGSTWRE
VSQGLPTEPY FGIVLRDAAA TDAAEVPGYY FGTRCGDVFV STEDSENWVQ AASHLPDVLC
VRAARM
|
|---|
| |