Gene Snas_4360 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSnas_4360 
Symbol 
ID8885561 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStackebrandtia nassauensis DSM 44728 
KingdomBacteria 
Replicon accessionNC_013947 
Strand
Start bp4648298 
End bp4650358 
Gene Length2061 bp 
Protein Length686 aa 
Translation table11 
GC content70% 
IMG OID 
Productamino acid permease-associated region 
Protein accessionYP_003513100 
Protein GI291301822 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0120164 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value0.0594951 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGGCTTC GACACTGGAC ACTCGCCGCC GCCATCGCGG CGGCGGGTGT CGTCGGGGCG 
GGCGCGGTGT GGGCCCGTCG CCATCTGTTC GCCGTCACCG TGGAGGGGCA CAGCATGAGC
CCCGCGCTGG AGCCCGGGGA TCGGGTGTTG ATGCGGCGCG GGGTGCGGGG GCTGCGGGCC
GGGGTGCTGG TCGTGGTCGC CCGTCCGGAC GAGATCACCG GCTGGACCGC GGGCGCCGTG
CTGGACACCG ACCTGTCGGT GGCGGATCGG TTTGTGAAGC GGGTCGCGGC CGTGGCCGGG
GAGTGGTATC CGGCCGCGAT GCGGCGCGGT GGGGTGGTCC CGCACGGGCA CGTGGTCGTG
CTGGGTGACC ACCCGCACAG CGTCGACTCC AAACAGTACG GTCCGTGTCC GCTTGACCAG
GTGCTCGGCG TCGAGGTGCG GCTGCCCGGC GGGTGGCGCG CGGGAATCGA AGATCGTCCA
TTACCCTCGT CGACCGTGCG GCATAATCGC CGCATGTCCG GCATTCCGGA TTTGTTACCG
GATGACCACA CTGGAAGGCG AGGTTTCCGC GTGGCGGGTT CACGGCTGTG GCAGACCAAG
ACGATCGAGC AGTCGATCGC CGACACCGAC GAGCCCGGCC ACCGGCTGAA GCGCACGCTC
GGTCCCTGGG ACCTGACCGT CTTCGGTGTC GCCGTCGTCA TCGGGGCGGG CGTGTTCACG
CTGGCCGCCA GCACCGCCGG AGACCGCGCC GGGCCCGCGG TGATCATCGC CTTCATCATC
GCCGCGATCG CCTGCGGCCT GGCCGCGCTG TGCTACGCCG AGTTCGCCTC CAGCGTCCCG
GTCGCGGGCA GCGCCTACAC CTACTCCTAC GCCGTGTTCG GCGAGTTCAT CGCCTGGATC
ATCGGCTGGG ACCTGGTACT GGAGTTCTCG GTGGCCGCGG GCGCCGTCGC CAAGGGCTGG
TCGCTGTACC TCGTCGAGGC CGCCGCCCAA CTGGGCGCGA AACTGCACAC CACCGTCGTG
GTCGCGGGTG TCTCGGTCGA CTGGGGCGCG CTGCTGCTCA TCGCCGCCCT CACCACGGTC
CTGGCCGCCG GGATCAACCT GTCGGCCAAG GTCTCCGCCG TCATCACCGC GATCAAGGTC
AGCGTGGTGC TGCTGGTCAT CGTCGTGGGC GCCTTCTACA TCACGCCCAG CAACTACGTC
CCGTTCGTGC CGCCCTCCCA GCCCGCCGAG GCGGGCGTCA GCGGCCTGGA CTCCACCCTG
TTCGCCACCG TCCTCGGCGA CGTCGGCGCC AAGTACGGCT GGTTCGGCGT GCTGGCGGGC
GCCTCGATCG TGTTCTTCGC GTTCATCGGC TTCGACATCG TCGCCACCAC CGCCGAGGAG
ACCCGCAACC CGCAGCGCGA CATGCCGCGC GGCATCCTGG GCTCGCTGGC CATCGTGACG
GTGCTGTACA TCGGCACCGC CCTGGTCATG ACCGGCATGC AGAAGTACAC CGAACTGGCC
ACCAAGGTCG ACCCCGAGAC CGGCGAACCG ATCCGCGCCA ACCTGGCCAC GGCCTTCACG
TCGCTGGGCG TGGACTGGGC GGCCAGCATC ATCGCCTTCG GGGCCCTGGC CGGACTGACG
ACGGTGGTGC TCGTACTGAT GCTCGGCCAG ATCCGGGTGT CCTTCGCCAT GTCGCGCGAC
CGGCTCTTGC CCGGCGGCTG GTCCATCACC GGCAAACGCG GCACCCCGGT GCGGCTGACC
GTCGGCATCG GCATCCTGGT GGCGGTGCTC GCCGGTTTCC TGCCGATCGA CCGGCTGGAG
GAGATGGTCA ACGTCGGCAC CCTGTTCGCG TTCGTGCTGG TGTCCATCGG CGTGATCGTG
CTGCGGGCCA AACGGCCCGA CCTGCAACGC GGCTTCCGGG CTCCCGGGGT CCCGGTGCTG
CCGATCGTGG CGGTGCTGGC CTGCCTGTGG CTGATGGTCA ACCTCAGCGT CCTGACCTGG
CTGCGGTTCA TCGGCTGGAT GGTGCTGGGA CTGGTGGTCT ACTTCGCGTA CGGCTTCCAC
AAGGCCAAGC TGGGACGCTG A
 
Protein sequence
MRLRHWTLAA AIAAAGVVGA GAVWARRHLF AVTVEGHSMS PALEPGDRVL MRRGVRGLRA 
GVLVVVARPD EITGWTAGAV LDTDLSVADR FVKRVAAVAG EWYPAAMRRG GVVPHGHVVV
LGDHPHSVDS KQYGPCPLDQ VLGVEVRLPG GWRAGIEDRP LPSSTVRHNR RMSGIPDLLP
DDHTGRRGFR VAGSRLWQTK TIEQSIADTD EPGHRLKRTL GPWDLTVFGV AVVIGAGVFT
LAASTAGDRA GPAVIIAFII AAIACGLAAL CYAEFASSVP VAGSAYTYSY AVFGEFIAWI
IGWDLVLEFS VAAGAVAKGW SLYLVEAAAQ LGAKLHTTVV VAGVSVDWGA LLLIAALTTV
LAAGINLSAK VSAVITAIKV SVVLLVIVVG AFYITPSNYV PFVPPSQPAE AGVSGLDSTL
FATVLGDVGA KYGWFGVLAG ASIVFFAFIG FDIVATTAEE TRNPQRDMPR GILGSLAIVT
VLYIGTALVM TGMQKYTELA TKVDPETGEP IRANLATAFT SLGVDWAASI IAFGALAGLT
TVVLVLMLGQ IRVSFAMSRD RLLPGGWSIT GKRGTPVRLT VGIGILVAVL AGFLPIDRLE
EMVNVGTLFA FVLVSIGVIV LRAKRPDLQR GFRAPGVPVL PIVAVLACLW LMVNLSVLTW
LRFIGWMVLG LVVYFAYGFH KAKLGR