Gene Snas_4343 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSnas_4343 
Symbol 
ID8885544 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStackebrandtia nassauensis DSM 44728 
KingdomBacteria 
Replicon accessionNC_013947 
Strand
Start bp4631698 
End bp4632942 
Gene Length1245 bp 
Protein Length414 aa 
Translation table11 
GC content71% 
IMG OID 
ProductFAD-dependent pyridine nucleotide-disulfide oxidoreductase 
Protein accessionYP_003513083 
Protein GI291301805 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value0.302839 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCACTT CAACGAGGAA ACACCGCATC GTCATACTGG GCGCCGGTTA CGCCGGATCC 
ATCACCGCGT CCCGGCTGGC CGGGCACCTG CGGCGCGACG AGGTCGACAT CACCGTGGTC
AACGCGGTGC CCGACTTCGT GGAGCGGGTG CGGCTGCACC AGCTGGCCGC CGGACAGGAA
CTCGCGAAGG TGCCGCTGGC CAGGGTGTTC CGGGGCAGCG GAATCCGGCT GCGACTCGGC
TGGGTGCGCG GCCTGGACAC CGAACAGCGG CGCGTCACTG TGGACACCGA CGGTGGCGTC
GACGCGATCG GCTACGACAC GCTCGTCTAC GCGCTGGGCA GCCAGGCGGC CGTCGCGCCG
GTGCCCGGAG TGGACACCCA CGGATTCAGT GTGTCCACCC GGACCGAGGC GCTCAGGCTG
CGCGACCGGA TCGCCGCCAC CGGCGGCACC GGCACCCTGA CCGTCGTGGG CGGCGGCCTG
ACCGGCCTGG AGGTCGCCTC CGAGATGGCC GAGTCCCACT CGCGACTGCG GGTCCGCATG
GTCACCGACG CCGAACTGGG CGACTGGCTG AACCCGCGCG CTCGCGCCTA CCTGCGTCAG
GTCTTCGCGC GGCTGGGCAT CGAGACCGTC ACCGCGAAGG TCGCCGAGGT GCGCGAGGAC
GCGATCGTCA CCACCGACGG CGACGTCCTC GACTCCGACA CGACAGTGTG GACGACCGGT
TTCGCGGTAC CGGGTCTGGC GACGGAATCG GGGCTGGCCA CCGACGCCGA CGGCCGGATC
CACATCGACC AGACCATGCG CTCGGCCTCG CACCCGGACG TCTACGCCGT CGGCGACGCC
GCCGTGGTGC GCGGACCGCA GGGCACGATC CTGCGGATGG CCTGCGGCAC CGGCGCTCCG
ATGGCCCTAC AGGCCGCCGA CGCCATCGCC GCCCGGCTGA GTGGGCGTCG CCCGCACCGG
TTCGTGTTCC GGTACATCCA CCAGAACATC AGCCTGGGGC GACGCGACGG ACTGATCCAG
TACGTCACCT CCGACGACCG TCCGAAGAAC ACCATCCTCA AGGGACGCGC GGCGGTGATG
TACAAGGAGA TGGTCAACGG CTGGGCCGTC ACCTTCGCCC GGCACGCCGG TCCGTACCTG
CCCCGGCCGC GCCGCCGTCT GGTGGCCGCC TCAGATCGAC GAGGCCAGTC CGTCGACGAC
CTGGGCGCCG GGGAGCTTGG CGAGCGTCTC GCCGCTCACC AGTAG
 
Protein sequence
MSTSTRKHRI VILGAGYAGS ITASRLAGHL RRDEVDITVV NAVPDFVERV RLHQLAAGQE 
LAKVPLARVF RGSGIRLRLG WVRGLDTEQR RVTVDTDGGV DAIGYDTLVY ALGSQAAVAP
VPGVDTHGFS VSTRTEALRL RDRIAATGGT GTLTVVGGGL TGLEVASEMA ESHSRLRVRM
VTDAELGDWL NPRARAYLRQ VFARLGIETV TAKVAEVRED AIVTTDGDVL DSDTTVWTTG
FAVPGLATES GLATDADGRI HIDQTMRSAS HPDVYAVGDA AVVRGPQGTI LRMACGTGAP
MALQAADAIA ARLSGRRPHR FVFRYIHQNI SLGRRDGLIQ YVTSDDRPKN TILKGRAAVM
YKEMVNGWAV TFARHAGPYL PRPRRRLVAA SDRRGQSVDD LGAGELGERL AAHQ