Gene Snas_4342 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSnas_4342 
Symbol 
ID8885543 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStackebrandtia nassauensis DSM 44728 
KingdomBacteria 
Replicon accessionNC_013947 
Strand
Start bp4631218 
End bp4631772 
Gene Length555 bp 
Protein Length184 aa 
Translation table11 
GC content71% 
IMG OID 
ProductYbaK/prolyl-tRNA synthetase associated region 
Protein accessionYP_003513082 
Protein GI291301804 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value0.519353 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCCCACA ACTGGACGAT CAACGGCAAG CTGACGGTGA CCCCGGCACC GCAACGGACC 
GAACTGCTGG CACCGCCGGT GGCGCGGGCG CTGCTGGCAC TGCCGGACGC GGCGGCCATC
GGTGTCGCGG CCATCGACGC GATGCTGGCC GACACCGCCC AGTTCTGCGA GTTCTACGAC
GTGCCGCTGT CGGCCTCGGC CAACTGCGTG GTGGTGGCGG GCAAACGCGG CGGCGAGGTC
CGCTACGCCG CGTGCCTGGC GCTGGCCACC ACCCGCGTCA ACGTCAACAC CGTGGTGCGC
CAGCACCTCA ACGCCCGCAA GGCGTCGTTC GCGCCGATGG ACGCCGCCGT GGAGATGACC
GGAATGGAGT ACGGCGGCAT CACCCCGATC GGGCTGCCCT CGGACTGGTC GATCCTGGTG
GACCTGAAGG TCGCCGCCGA ACCCGAGCTG GTGATCGGCG GCGGCTCTCG TGGCGCGAAG
CTACTGGTGA GCGGCGAGAC GCTCGCCAAG CTCCCCGGCG CCCAGGTCGT CGACGGACTG
GCCTCGTCGA TCTGA
 
Protein sequence
MAHNWTINGK LTVTPAPQRT ELLAPPVARA LLALPDAAAI GVAAIDAMLA DTAQFCEFYD 
VPLSASANCV VVAGKRGGEV RYAACLALAT TRVNVNTVVR QHLNARKASF APMDAAVEMT
GMEYGGITPI GLPSDWSILV DLKVAAEPEL VIGGGSRGAK LLVSGETLAK LPGAQVVDGL
ASSI