Gene Snas_4338 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSnas_4338 
Symbol 
ID8885539 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStackebrandtia nassauensis DSM 44728 
KingdomBacteria 
Replicon accessionNC_013947 
Strand
Start bp4627943 
End bp4628491 
Gene Length549 bp 
Protein Length182 aa 
Translation table11 
GC content75% 
IMG OID 
Producthypothetical protein 
Protein accessionYP_003513078 
Protein GI291301800 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.938729 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones20 
Fosmid unclonability p-value0.356858 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGCACGTGA ACGCGACAAC CGACGGCTTC CAGCCCGCCC AGCGGCTCGT CGACCTCGCC 
AACCTGGTCC GCCACGACCC GTCCGCGAGC CGCGAGCGAC TGGCCGAGCT GCTGGCCACC
CACGGCGAGT CCGCCGCCGA GCTGGCGAGC CTGACCGCCC GCGACGCCGA ACGGCTGCGG
GCCACCGCCA CGGCGCTGGG CGACGTGCTC GCGCTGACCG ACGTCGACGC CGCCGCCCAC
GCGCTCAACG CCCTCCTCGA CGAGCACTCC GCCCACCCGC GACTGTCCAA CCACGACGGA
CACGCGTGGC ACCTGCACGT CGAGCGCGAC TCCGGCTGGG ACACCTGGCT CGCCGCGTCC
GGGGCCCTCG CGCTGGCCCA GCTGCTCACC GAACGCGGCC GCCTCGCCTG GGGCGAGTGC
GCCGCCGAGG GCTGCCGCAA CCTGTTCCTG GACGACGGCC CCGGCTCCCC CCGCCGCTAC
TGTACGACCA AGTGCGCCAG CCGAGCCCGA GTGGCCGAAC ACCGCGCCCG CAAACGAACC
GCGAGCTAG
 
Protein sequence
MHVNATTDGF QPAQRLVDLA NLVRHDPSAS RERLAELLAT HGESAAELAS LTARDAERLR 
ATATALGDVL ALTDVDAAAH ALNALLDEHS AHPRLSNHDG HAWHLHVERD SGWDTWLAAS
GALALAQLLT ERGRLAWGEC AAEGCRNLFL DDGPGSPRRY CTTKCASRAR VAEHRARKRT
AS