Gene Snas_4312 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSnas_4312 
Symbol 
ID8885513 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStackebrandtia nassauensis DSM 44728 
KingdomBacteria 
Replicon accessionNC_013947 
Strand
Start bp4605250 
End bp4606851 
Gene Length1602 bp 
Protein Length533 aa 
Translation table11 
GC content70% 
IMG OID 
ProductD-3-phosphoglycerate dehydrogenase 
Protein accessionYP_003513052 
Protein GI291301774 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones23 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCACGC CCGTCCGTCC CGTCGTCGTC ATCGCCGACA AGCTCGCCGA CAGCGCCGTG 
GCCGCCCTCG GGGGCGACTT CGACGTTCGT GTCATCGACG GCACCGACAT CCCGACGCTG
CACTCCGCGC TGGCCGACGC CGACGCCGTG ATCGTGCGCA GTGCGTCCCG TATCGACGCC
GCCGCCCTGG CCGCCGCTCC GAAGCTTCAG GTGGTCGCTC GCGCGGGCGT TGGCCTGGAC
AATGTGGACA TCAACGTGGC CACCGAGCGC GGCGTGATGG TTGTGAACGC TCCCACGTCG
AACATCGTGT CGGCCGCCGA GCAGGCCGTG GCGCTGTTGC TGGCCACCGC CCGCAACACG
ACCATCGCCG ACGCCTCGCT GAAGCGCGGC GAGTGGAAGC GGTCGCAGTT CACCGGCGTC
GAGCTGGCCG GGAAGACCGT CGGCGTGGTG GGCCTGGGCA AGATCGGGCA GCTGTTCGCG
GCCCGCATGG CCGCCTTCGA CACCAACCTC ATCGCCTACG ACCCCTACGT GCAGCCCGCC
CGGGCCGCCC AGATGGGGAT CCAGCTGGTG AGCCTGGACG ACCTGCTGCT GCGCAGTGAC
TTCATCTCGA TCCACCTGCC CAAGACGCCC GAGACCATCG GCCTGATCGG CAAGGACGAG
CTGGACAAGG TCAAGCCGGG CGTGCGGATC GTCAACGCCG CCCGTGGTGG CCTCATCGAC
GAGGCCGCGC TGGCCGCGGC GCTGGCCGAC GGCCGGGTGG CCGGGGCCGG TATCGACGTG
TTCGCCACCG AGCCGTGCAC CGACTCGCCG CTGTTCGCGC TGGACAACGT GGTCGTCACC
CCGCACCTGG GTGCCTCGAC CCGGGAGGCG CAGGACAACG CCGGTCTCCA GGTCGTCAAG
AGCGTGAAAC TGGCGCTGGC GGGCGAGTTC GTGCCCGACG CCGTGAACGT CAAGGCCGGA
AGCGGGGTCG CCGAGGACGT GCGGCCGCTG CTGCCGCTGG CCGAGCGGCT GGGACGCCTG
TTCACCGCGA TCGCCGAGGG CCCGGCCCAG TCGGTGACCG TCGAGGTGCG CGGCGAAGTG
ATCGACTCCG ACGTGTCGGT GTTGCAGCTG GCCGCCACCA AGGGACTGTT CGTGGACGTC
GCCGACCAGG TGACCTACGT CAACGCGCCG CTGCTGGCCG CCGACAAGGG GATCGACGTC
GGGCTGTTCA CCTCCGCCGA GAGCCCCGAG TTCCACAACC AGGTGACCGT GCGCGGTGCG
CTGGCCGACG GCCGGGCGGT GTCGGTGTCG GGCACCGTGA CCCAGGGGCC GCGTGAGGTT
CGCAAGCTCA CCGAGATCGA CGGGTACGAC GTCGAGATCG ACGCCGAGGG ACCGCTGTTG
ATCATGCGTT ACACCGACCG GCCCGGCATC GTGGGTCTCA TCGGTGGTTC GCTGGGCGAC
GAGTCGATCA ACATCGGCGC GATGCAGGTG TCGCGGCGCG AGGCCGGGGG CGAGGCGCTG
ATGATCGTCG CCACCGACGC CGAGGTGCCC GCGGACCTGT TGACCAAGCT GGCCGGAACC
GTCGGGGCCA CCTCCGCCAG CGCGGTTACT CTCACGGATT AG
 
Protein sequence
MTTPVRPVVV IADKLADSAV AALGGDFDVR VIDGTDIPTL HSALADADAV IVRSASRIDA 
AALAAAPKLQ VVARAGVGLD NVDINVATER GVMVVNAPTS NIVSAAEQAV ALLLATARNT
TIADASLKRG EWKRSQFTGV ELAGKTVGVV GLGKIGQLFA ARMAAFDTNL IAYDPYVQPA
RAAQMGIQLV SLDDLLLRSD FISIHLPKTP ETIGLIGKDE LDKVKPGVRI VNAARGGLID
EAALAAALAD GRVAGAGIDV FATEPCTDSP LFALDNVVVT PHLGASTREA QDNAGLQVVK
SVKLALAGEF VPDAVNVKAG SGVAEDVRPL LPLAERLGRL FTAIAEGPAQ SVTVEVRGEV
IDSDVSVLQL AATKGLFVDV ADQVTYVNAP LLAADKGIDV GLFTSAESPE FHNQVTVRGA
LADGRAVSVS GTVTQGPREV RKLTEIDGYD VEIDAEGPLL IMRYTDRPGI VGLIGGSLGD
ESINIGAMQV SRREAGGEAL MIVATDAEVP ADLLTKLAGT VGATSASAVT LTD