Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Snas_4312 |
Symbol | |
ID | 8885513 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Stackebrandtia nassauensis DSM 44728 |
Kingdom | Bacteria |
Replicon accession | NC_013947 |
Strand | - |
Start bp | 4605250 |
End bp | 4606851 |
Gene Length | 1602 bp |
Protein Length | 533 aa |
Translation table | 11 |
GC content | 70% |
IMG OID | |
Product | D-3-phosphoglycerate dehydrogenase |
Protein accession | YP_003513052 |
Protein GI | 291301774 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 23 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGACCACGC CCGTCCGTCC CGTCGTCGTC ATCGCCGACA AGCTCGCCGA CAGCGCCGTG GCCGCCCTCG GGGGCGACTT CGACGTTCGT GTCATCGACG GCACCGACAT CCCGACGCTG CACTCCGCGC TGGCCGACGC CGACGCCGTG ATCGTGCGCA GTGCGTCCCG TATCGACGCC GCCGCCCTGG CCGCCGCTCC GAAGCTTCAG GTGGTCGCTC GCGCGGGCGT TGGCCTGGAC AATGTGGACA TCAACGTGGC CACCGAGCGC GGCGTGATGG TTGTGAACGC TCCCACGTCG AACATCGTGT CGGCCGCCGA GCAGGCCGTG GCGCTGTTGC TGGCCACCGC CCGCAACACG ACCATCGCCG ACGCCTCGCT GAAGCGCGGC GAGTGGAAGC GGTCGCAGTT CACCGGCGTC GAGCTGGCCG GGAAGACCGT CGGCGTGGTG GGCCTGGGCA AGATCGGGCA GCTGTTCGCG GCCCGCATGG CCGCCTTCGA CACCAACCTC ATCGCCTACG ACCCCTACGT GCAGCCCGCC CGGGCCGCCC AGATGGGGAT CCAGCTGGTG AGCCTGGACG ACCTGCTGCT GCGCAGTGAC TTCATCTCGA TCCACCTGCC CAAGACGCCC GAGACCATCG GCCTGATCGG CAAGGACGAG CTGGACAAGG TCAAGCCGGG CGTGCGGATC GTCAACGCCG CCCGTGGTGG CCTCATCGAC GAGGCCGCGC TGGCCGCGGC GCTGGCCGAC GGCCGGGTGG CCGGGGCCGG TATCGACGTG TTCGCCACCG AGCCGTGCAC CGACTCGCCG CTGTTCGCGC TGGACAACGT GGTCGTCACC CCGCACCTGG GTGCCTCGAC CCGGGAGGCG CAGGACAACG CCGGTCTCCA GGTCGTCAAG AGCGTGAAAC TGGCGCTGGC GGGCGAGTTC GTGCCCGACG CCGTGAACGT CAAGGCCGGA AGCGGGGTCG CCGAGGACGT GCGGCCGCTG CTGCCGCTGG CCGAGCGGCT GGGACGCCTG TTCACCGCGA TCGCCGAGGG CCCGGCCCAG TCGGTGACCG TCGAGGTGCG CGGCGAAGTG ATCGACTCCG ACGTGTCGGT GTTGCAGCTG GCCGCCACCA AGGGACTGTT CGTGGACGTC GCCGACCAGG TGACCTACGT CAACGCGCCG CTGCTGGCCG CCGACAAGGG GATCGACGTC GGGCTGTTCA CCTCCGCCGA GAGCCCCGAG TTCCACAACC AGGTGACCGT GCGCGGTGCG CTGGCCGACG GCCGGGCGGT GTCGGTGTCG GGCACCGTGA CCCAGGGGCC GCGTGAGGTT CGCAAGCTCA CCGAGATCGA CGGGTACGAC GTCGAGATCG ACGCCGAGGG ACCGCTGTTG ATCATGCGTT ACACCGACCG GCCCGGCATC GTGGGTCTCA TCGGTGGTTC GCTGGGCGAC GAGTCGATCA ACATCGGCGC GATGCAGGTG TCGCGGCGCG AGGCCGGGGG CGAGGCGCTG ATGATCGTCG CCACCGACGC CGAGGTGCCC GCGGACCTGT TGACCAAGCT GGCCGGAACC GTCGGGGCCA CCTCCGCCAG CGCGGTTACT CTCACGGATT AG
|
Protein sequence | MTTPVRPVVV IADKLADSAV AALGGDFDVR VIDGTDIPTL HSALADADAV IVRSASRIDA AALAAAPKLQ VVARAGVGLD NVDINVATER GVMVVNAPTS NIVSAAEQAV ALLLATARNT TIADASLKRG EWKRSQFTGV ELAGKTVGVV GLGKIGQLFA ARMAAFDTNL IAYDPYVQPA RAAQMGIQLV SLDDLLLRSD FISIHLPKTP ETIGLIGKDE LDKVKPGVRI VNAARGGLID EAALAAALAD GRVAGAGIDV FATEPCTDSP LFALDNVVVT PHLGASTREA QDNAGLQVVK SVKLALAGEF VPDAVNVKAG SGVAEDVRPL LPLAERLGRL FTAIAEGPAQ SVTVEVRGEV IDSDVSVLQL AATKGLFVDV ADQVTYVNAP LLAADKGIDV GLFTSAESPE FHNQVTVRGA LADGRAVSVS GTVTQGPREV RKLTEIDGYD VEIDAEGPLL IMRYTDRPGI VGLIGGSLGD ESINIGAMQV SRREAGGEAL MIVATDAEVP ADLLTKLAGT VGATSASAVT LTD
|
| |