Gene Snas_4285 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSnas_4285 
Symbol 
ID8885486 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStackebrandtia nassauensis DSM 44728 
KingdomBacteria 
Replicon accessionNC_013947 
Strand
Start bp4579321 
End bp4580559 
Gene Length1239 bp 
Protein Length412 aa 
Translation table11 
GC content73% 
IMG OID 
Productmajor facilitator superfamily MFS_1 
Protein accessionYP_003513027 
Protein GI291301749 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones46 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTATCTGT CGGCCACCCG CGCCGCCGAC TCGGCCCGCA CCACCACGGC CACCCCCGCC 
GCCCGCCGCG TCGGCGGTAC CGTCATCGCC CTGGGACTGG TCAGCCTGGT CACCGACATG
TCGGCCGAGA TGATCACCGC GATCCTGCCG ATGTACCTCA TGTACGGGCT GGGCCTCGGC
TACCTCCACC TGGGAATGCT GGACGGGCTC TACACCGGAG CGACCGCCCT GCTGCGCCTC
GGCGGCGGCT TCGCCGCCGA CCGGCTCAAC CGCCCCAAGG CCGTCGCGCT GTCCGGCTAC
GGCCTGTCGG CCGCCACCAA ACTGGGCTTC CCGCTGGTGG GCGCCTCCCT GGGCGGCATC
GGCACCCTCG TGGGTCTCGA CCGGGCGGGC AAGGGCATCC GCACCGCGCC TCGCGACGCC
CTCATCACCG CCGCCACCGC GCCCGAAGCG CTGGGCCGCG CCTTCGGCGT CCACCGGGCC
CTCGACACCG CCGGAGCCCT GCTGGGTCCA CTGTTGGCCT TCGCCCTCCT CGCCGGGGTC
GCGGGCGGCT ACGACCAGGT GTTCGTCGTC AGCTTCTGCC TCGCCGTCGT CGGCGTGCTC
ATCCTGGCGT TCTTCGTCAA CAACCCGCCC GCCGCCCCCG GTCACCGCCG CGCCACCGTC
CGCGCCGCGC TGTCGGCGGT CACTGACGCC CGACTGCGCC GCGTCTGGCT GGCCACCGGC
ATCCTCGGCG TCGCGACGGT CGGCGACATG TTCCTGTACC TGGCGATCCA GCGGCAACTC
GGCCTACCGC CCCAAGCCTT GCCGCTGCTG CCGCTGGGCA GCGCCCTGAC CTTCATGCTC
GCGGCGGCCC CGGTGGGCCG CGTCGCCGAC CGGCTGGGAC GGTGGCGCGT CTTCCTGGCC
GGGCACCTAC TACTGCTCGG CGGCTACCTG GCCCTGACCG GCACGGCATC CGGCTGGCCG
ATTGCCGTCG CGGTACTCGC CATGCACGGC GTCTTCTACG CCTGCTCCGA CGGCGTCCTC
ATGGCCCACA TCGGACCATC CATCCCCGAC TCGGTCCGCG CCACCGGCAT GGCCGTCATC
CAAACCACCC AGGCCCTGGC CCGAGCTGGC GGCGCGGTGG TCTTCGGCAT CGTGGCCCAA
ACCGTCGCCC TGTCCACCGC CTTCGGCTTC GCCGCCGCAG CACTCGCGGC AGCCGTAACC
GCCAGCGCCG TCCTCTGCCT ACGAAAGCCG AGCCCGTGA
 
Protein sequence
MYLSATRAAD SARTTTATPA ARRVGGTVIA LGLVSLVTDM SAEMITAILP MYLMYGLGLG 
YLHLGMLDGL YTGATALLRL GGGFAADRLN RPKAVALSGY GLSAATKLGF PLVGASLGGI
GTLVGLDRAG KGIRTAPRDA LITAATAPEA LGRAFGVHRA LDTAGALLGP LLAFALLAGV
AGGYDQVFVV SFCLAVVGVL ILAFFVNNPP AAPGHRRATV RAALSAVTDA RLRRVWLATG
ILGVATVGDM FLYLAIQRQL GLPPQALPLL PLGSALTFML AAAPVGRVAD RLGRWRVFLA
GHLLLLGGYL ALTGTASGWP IAVAVLAMHG VFYACSDGVL MAHIGPSIPD SVRATGMAVI
QTTQALARAG GAVVFGIVAQ TVALSTAFGF AAAALAAAVT ASAVLCLRKP SP