Gene Snas_4274 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSnas_4274 
Symbol 
ID8885475 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStackebrandtia nassauensis DSM 44728 
KingdomBacteria 
Replicon accessionNC_013947 
Strand
Start bp4567035 
End bp4567787 
Gene Length753 bp 
Protein Length250 aa 
Translation table11 
GC content69% 
IMG OID 
Productthymidylate synthase flavin-dependent 
Protein accessionYP_003513016 
Protein GI291301738 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.933149 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones44 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCGGGAA TCGTGTCGCC GCAGGTCACC ATCATCGCCT GGACCCATTT CGAGGCACCC 
GAGGACGTGC CCTGGTCGAC CGACGCCGAC GGCGGTCAGG CCCTGGCCGA GTTCGCCGGG
CGGGCGTGCT ACCAGTCCTG GAACAAGCCC AACCCCAAGA CCGCCACCAA CGCCGGTTAT
CTCGACCACA TCCTCCAGGT CGGGCACCTG TCGGTCCTGG AGCACGGCAG CGTCTCGTTC
TACCTGACCG GGATCTCGCG ATCCCTGACC CACGAACTGA TCCGGCACCG CCACTTCTCC
TACAGCCAGC TGTCGCAGCG CTACGTGCCC GAGCGCGACG CCCAGATGGT CGAGCCGGAC
GTCATCGCCG CCGACCCCGA CCTGCACGAG AAGTTCCTGG CCGCCGCCGA CGCCTCGCAG
CGCGCCTACA CCGAGCTGCT GGAGGGCCTG GAGAAGAAGT TCGCCGAGGA GCCCAACGCC
ACCCTGCGCC GCAAGCAGGC CCGGCAGGCC GCCCGCGCCG TGCTGCCCAA CGCCACCGAG
ACCCGCATCG TCGTGACCGG CAACTACCGG GCGTGGCGCC ACTTCATCGC GATGCGCGCC
TCCGAGCACG CCGACGTCGA GATCCGCGCC CTGGCCGTCA CCTGCCTGAA GCGGCTCAAG
GAGAAGGTCC CCAACGTGGT CGCCGACTTC AGCATCAGTT CCCTGTCCGA CGGCACCGAA
GTGGCCTCCA GCCCCTACGT CCACGAGGGG TGA
 
Protein sequence
MPGIVSPQVT IIAWTHFEAP EDVPWSTDAD GGQALAEFAG RACYQSWNKP NPKTATNAGY 
LDHILQVGHL SVLEHGSVSF YLTGISRSLT HELIRHRHFS YSQLSQRYVP ERDAQMVEPD
VIAADPDLHE KFLAAADASQ RAYTELLEGL EKKFAEEPNA TLRRKQARQA ARAVLPNATE
TRIVVTGNYR AWRHFIAMRA SEHADVEIRA LAVTCLKRLK EKVPNVVADF SISSLSDGTE
VASSPYVHEG