Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Snas_4196 |
Symbol | |
ID | 8885397 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Stackebrandtia nassauensis DSM 44728 |
Kingdom | Bacteria |
Replicon accession | NC_013947 |
Strand | + |
Start bp | 4495238 |
End bp | 4496077 |
Gene Length | 840 bp |
Protein Length | 279 aa |
Translation table | 11 |
GC content | 72% |
IMG OID | |
Product | Methyltransferase type 12 |
Protein accession | YP_003512939 |
Protein GI | 291301661 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 0.350436 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 12 |
Fosmid unclonability p-value | 0.00616764 |
Fosmid Hitchhiker | No |
Fosmid clonability | decreased coverage |
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Sequence |
Gene sequence | ATGTCCAACG ACGGTTTCGT GTGGTCGGCC GAGGCCTCCG ACCTGGCCAA GGCCGCGCAG AGCGACGGCG AGTTCTACCG GCTCATGGCC GCCGAACTGC TGCGACCCGA CGACCGGCTG GCCGTCGACT TCGGTTGCGG GGGCGGCGGA ATGGCCCTGG CGCTGCGCGA CCGTGCCGCC GAGACCGGAC AGGCCACCCG CGTCGTGGGC CTGGACGCCC ACGAGGAGGT CTTCACGACC GTCGCCGCCG ACAACCCCGA CCTCGGCTTC GCCGTCGCGT CGTTCGAGGA CTCCCCCGAG CAGTTGCGCG CCGCCGCCGG TGGCGCCCCC GACCTGGTGT GGGCGCGCGG CGCCCTGCAC CACGCCGACG ACGAGCAGGT CGCCCTGCGC ACCCTCGCCG AAGTGCTGGC CGACGGCGGC GTCATCGCGC TGGCCGAGGG CGGCACCACC GCCGCCTGCC TGCCCAACTA CCTGGGCATC GGCAAGCCCG GCCTCGACAA GCGGCTCAAC GCCGCCGCCG ACGAGGCCGC CCGCCGCCGG ATGGCCGACC TCAAACCCAT GCCCTACGGC TGGCTCACCG GGCTGCGCAA CGCGGGTTTC ATCGACGTGA CCACCCGCAA CATCCTGTTC GACAAGCCCG CCCCACTCGA GGGCGCCGAC CTCGACCACG TGCTCCGCAA GTTCGCCAAA CAGATCGAGT GGTCCGAGGA CCTGCTGTCG CCCGAGGACC TGGAGTGCTG GCGGCGACTG CTGGACCCCG ACGACCCCGT CTGGCTGGGA CTGCGCGACG ACCTGTTCTA CCTCGCGGCC CAAAGCGTCC ATATCGGCCG AAAGCCTTAG
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Protein sequence | MSNDGFVWSA EASDLAKAAQ SDGEFYRLMA AELLRPDDRL AVDFGCGGGG MALALRDRAA ETGQATRVVG LDAHEEVFTT VAADNPDLGF AVASFEDSPE QLRAAAGGAP DLVWARGALH HADDEQVALR TLAEVLADGG VIALAEGGTT AACLPNYLGI GKPGLDKRLN AAADEAARRR MADLKPMPYG WLTGLRNAGF IDVTTRNILF DKPAPLEGAD LDHVLRKFAK QIEWSEDLLS PEDLECWRRL LDPDDPVWLG LRDDLFYLAA QSVHIGRKP
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