Gene Snas_4195 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSnas_4195 
Symbol 
ID8885396 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStackebrandtia nassauensis DSM 44728 
KingdomBacteria 
Replicon accessionNC_013947 
Strand
Start bp4494546 
End bp4495091 
Gene Length546 bp 
Protein Length181 aa 
Translation table11 
GC content69% 
IMG OID 
Producthypothetical protein 
Protein accessionYP_003512938 
Protein GI291301660 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.225203 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value0.0111128 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCGTCA TGGCCGACCG GCTCGACAAC ATGGACATCA CCGTGTCGTC GCCGGACGGG 
AACATCGAGG GCCGGTACCG GCGGCGCGGC GAACTGACCC TGGAGTTCCG CGGCGACGCC
TACGAGCAGT ACCGGCAGCA CACCCTCGAA CACCAGCTGG CGCGGCTGGC GACGCTGCTG
TGGACCGGCT ACCAGCGTGA GTACGACGCC GCCGTCAGCG AGGTCGTCGG ACATCCCGTC
AAGGACGAAC GGCACCTGTG GGACGCCAAC CGCCGCCGCT ACCGGGAAGC ACAGCGCGCG
ACGGCCGCCA GCGGCATGTC CGCCGGTGGC CGGGTCTACA TCGAGAACAC CGGCATGCTC
AGTTGGCACG TCGTCATCCG CGACGGCACG CTCGGCGAAC TCACCGCGGC CGAGTTCGCT
TCCGAATGCC TCAGCGCCTT CGACGCGCTG TGGCGCGACT ACCGATCCAA GATGGCCGCC
CTGCGGGCCG AGCACTACGG CCTCAGCTTC GCGTCCAAAC GCCGTGAACG TCAACCCCGG
CACTGA
 
Protein sequence
MSVMADRLDN MDITVSSPDG NIEGRYRRRG ELTLEFRGDA YEQYRQHTLE HQLARLATLL 
WTGYQREYDA AVSEVVGHPV KDERHLWDAN RRRYREAQRA TAASGMSAGG RVYIENTGML
SWHVVIRDGT LGELTAAEFA SECLSAFDAL WRDYRSKMAA LRAEHYGLSF ASKRRERQPR
H