Gene Snas_4176 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSnas_4176 
Symbol 
ID8885377 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStackebrandtia nassauensis DSM 44728 
KingdomBacteria 
Replicon accessionNC_013947 
Strand
Start bp4472608 
End bp4473564 
Gene Length957 bp 
Protein Length318 aa 
Translation table11 
GC content68% 
IMG OID 
Productcation diffusion facilitator family transporter 
Protein accessionYP_003512920 
Protein GI291301642 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.588864 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value0.120202 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGACGACAG GACAGACGAT CCCCGAGGCA CCCGAGTCGG AGACCCTGGG CACCGTCATC 
GTGGCGCTGC TGATGAACCT GGCGATCGCG GTGTCCAAGG CGGTCGCGGG GCTGCTCAGC
GGTTCGGCGG CGATGCTGTC CGAGGCGGCA CATTCCGTCG CCGACACGAT GACCGAGGTG
TTCCTGTACA TCGCGCTGCG GCGCGGCTCC CGAGGCCCCA ACGAACGCCA CCCCTTCGGG
TACGGCCGGG AGGCGTACTT CTGGGCGTTC ATGGCCGCCA CCTTCACCTT CATCGTCGGC
GGCGGTTTCT CCATCACCCA CGGGTTCAAC GAGATCACCG CCGACGAGCC GCCCGGCGAC
TACCTGGTGT CGTACATCGT GCTGGCGATC TCCTTCGGAC TGGAGAGCGT CTCGCTGGCC
AAGGGGCTCA AGCAGACGCT GAGCGAGTCG CGACGGCTGA AGGTGTCGCC GTGGACGTTC
TTGAAGCTCA CCCCGGACAC CTCGGTCAAG GCCGTGGTGC TGGAGGACAT CGCGGCGCTG
GCCGGGCTGG TGATCGCGGG CGCGGGGCTG GGCCTCACCG AACTGACCGG CAGCCCCGTC
TACGACGGGG TCGCGTCCAT GGTCATCGGG GTGCTGCTGC TGGTGGTCGC GGTGGTGCTG
GCGGCGGCCA ACAAGTCGCT CTTGATCGGA CAGTCGGTGC CGCCCCGGAT GCGGGACCTC
ATCACGGAGG AACTGCTGGC GGTTCCCACG ATCAAGCACG TGCGGGAGCT GTACACCATC
CACCTGGGAC CGAGCCAGAT CTTCGTCGCC GCGAAGGTCG ACTTCGCCGA CACCGCCAGC
GGCGCGTCCA TCGAGGACGA CAGCGACAGC GCCGAACGCC GGTTGCGGCA ACGGTTCCCG
CAGATCAGTT TCGTGTTCCT GGACCCGACC CCGGATCCGC CGTCGCGCGA TTCCTGA
 
Protein sequence
MTTGQTIPEA PESETLGTVI VALLMNLAIA VSKAVAGLLS GSAAMLSEAA HSVADTMTEV 
FLYIALRRGS RGPNERHPFG YGREAYFWAF MAATFTFIVG GGFSITHGFN EITADEPPGD
YLVSYIVLAI SFGLESVSLA KGLKQTLSES RRLKVSPWTF LKLTPDTSVK AVVLEDIAAL
AGLVIAGAGL GLTELTGSPV YDGVASMVIG VLLLVVAVVL AAANKSLLIG QSVPPRMRDL
ITEELLAVPT IKHVRELYTI HLGPSQIFVA AKVDFADTAS GASIEDDSDS AERRLRQRFP
QISFVFLDPT PDPPSRDS