Gene Snas_4170 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSnas_4170 
Symbol 
ID8885371 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStackebrandtia nassauensis DSM 44728 
KingdomBacteria 
Replicon accessionNC_013947 
Strand
Start bp4465873 
End bp4466493 
Gene Length621 bp 
Protein Length206 aa 
Translation table11 
GC content72% 
IMG OID 
ProductLysine exporter protein (LYSE/YGGA) 
Protein accessionYP_003512914 
Protein GI291301636 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.319888 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones22 
Fosmid unclonability p-value0.802735 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGACATGT CGCAGCTGTA CCTGTTCATC GCCGCCTCCC TGGTGTTCGT CGCCGTGCCC 
GGCGCCAACA CCGTCTACAT CGTCACCTGC GCCATCGACC AGGGGCGGCG CGCCGGAATC
CTGTCGGCCG TCGGCGTCGA GACCGGCACC CTGGTGCACG TCGCGATCGC CGTGGCGGGC
CTGGCAGCCG TGGTGGCCGC GTTCCCGCTG GCGCTGACCG CCATCAAGAT CGCGGGCGGC
GCCTACCTGC TGTACCTGGG GATCCGGGTG CTGCGCCGCC GATCCACCGC CGAGGAGCCG
ATGCGGGCGG CCCCCTCGTC GTGGCGGGTG TTCCGTGACG GCCTGGTCGT CAACGTCCTC
AACCCCAAGG TGGCGCTGTT CTTCCTGGCC TTCCTGCCGC AGTTCGTTAC CGCGCAGTCC
GCCGCCCGCC CGCAGATGCT GCTGCTGGGC TGCGTGTTCT TCGCGCTGGC CCTGCTGCTG
GACCTGATCT ACGCCGTCGC CGGTGGCGCC CTGGGCGGCT GGCTGTCGCA ACGTCCCCGG
GTCCGCGAAG GCCAGCGCTA CGCCGTGGCG GCCGTCTACC TCGTGCTCGG CGGCTGGGCC
AGCCTCGCCG GAGTCACCTG A
 
Protein sequence
MDMSQLYLFI AASLVFVAVP GANTVYIVTC AIDQGRRAGI LSAVGVETGT LVHVAIAVAG 
LAAVVAAFPL ALTAIKIAGG AYLLYLGIRV LRRRSTAEEP MRAAPSSWRV FRDGLVVNVL
NPKVALFFLA FLPQFVTAQS AARPQMLLLG CVFFALALLL DLIYAVAGGA LGGWLSQRPR
VREGQRYAVA AVYLVLGGWA SLAGVT