Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Snas_4170 |
Symbol | |
ID | 8885371 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Stackebrandtia nassauensis DSM 44728 |
Kingdom | Bacteria |
Replicon accession | NC_013947 |
Strand | - |
Start bp | 4465873 |
End bp | 4466493 |
Gene Length | 621 bp |
Protein Length | 206 aa |
Translation table | 11 |
GC content | 72% |
IMG OID | |
Product | Lysine exporter protein (LYSE/YGGA) |
Protein accession | YP_003512914 |
Protein GI | 291301636 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 0.319888 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 22 |
Fosmid unclonability p-value | 0.802735 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGACATGT CGCAGCTGTA CCTGTTCATC GCCGCCTCCC TGGTGTTCGT CGCCGTGCCC GGCGCCAACA CCGTCTACAT CGTCACCTGC GCCATCGACC AGGGGCGGCG CGCCGGAATC CTGTCGGCCG TCGGCGTCGA GACCGGCACC CTGGTGCACG TCGCGATCGC CGTGGCGGGC CTGGCAGCCG TGGTGGCCGC GTTCCCGCTG GCGCTGACCG CCATCAAGAT CGCGGGCGGC GCCTACCTGC TGTACCTGGG GATCCGGGTG CTGCGCCGCC GATCCACCGC CGAGGAGCCG ATGCGGGCGG CCCCCTCGTC GTGGCGGGTG TTCCGTGACG GCCTGGTCGT CAACGTCCTC AACCCCAAGG TGGCGCTGTT CTTCCTGGCC TTCCTGCCGC AGTTCGTTAC CGCGCAGTCC GCCGCCCGCC CGCAGATGCT GCTGCTGGGC TGCGTGTTCT TCGCGCTGGC CCTGCTGCTG GACCTGATCT ACGCCGTCGC CGGTGGCGCC CTGGGCGGCT GGCTGTCGCA ACGTCCCCGG GTCCGCGAAG GCCAGCGCTA CGCCGTGGCG GCCGTCTACC TCGTGCTCGG CGGCTGGGCC AGCCTCGCCG GAGTCACCTG A
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Protein sequence | MDMSQLYLFI AASLVFVAVP GANTVYIVTC AIDQGRRAGI LSAVGVETGT LVHVAIAVAG LAAVVAAFPL ALTAIKIAGG AYLLYLGIRV LRRRSTAEEP MRAAPSSWRV FRDGLVVNVL NPKVALFFLA FLPQFVTAQS AARPQMLLLG CVFFALALLL DLIYAVAGGA LGGWLSQRPR VREGQRYAVA AVYLVLGGWA SLAGVT
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