Gene Snas_4164 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSnas_4164 
Symbol 
ID8885365 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStackebrandtia nassauensis DSM 44728 
KingdomBacteria 
Replicon accessionNC_013947 
Strand
Start bp4456503 
End bp4458569 
Gene Length2067 bp 
Protein Length688 aa 
Translation table11 
GC content70% 
IMG OID 
Productputative PAS/PAC sensor protein 
Protein accessionYP_003512908 
Protein GI291301630 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.412767 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value0.407902 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGGAAGCG GGGGCTTCGC CGACGAGCCG ATGCGCATGA GCGACGGCAT GCATCGGCTG 
TTCAACAGCG AGTTGCGCAT CGCCACCGTC ATCGTCGACG CCACCGGCAC CATCACGTAC
TTCGGCCCCA ACGCCGAGAC CCTGACCGGG TTCCGGCACA CCGAGATCAT CGGCCGGGAT
CTGCAGGTCG TCTCCGGCAC GTCGGCCTAT TTCGACAGTC GCGAGTACCT GTCCCGGCCG
CCGGGCGCCG CGCCGGAGTT CCGGCGGCTG CGCCGCTCCG ACGGCAGCAC CCGGGCGGTG
CAGGTCTACC GGCATCCACT GCCCAAACCC ACAGGACCGC CCGACACGCT GCTGCTGGTG
GTCGACGTCG CCGAGAACGC CGAGGCCGAG GTGGGACTGG GGCTGCTCAA CGCGTTCTTC
CAGCAGTCGA CCGTCGGTTT CGTCATCATG GACACCGAGC TGCGGTACGT GGCGCTCAAC
GAGGCCCTGG CCCGGCTCAA CCGGCGCCCG ATCGTCGACC ACCTGGGCCG CCGGTTTCGC
GAGATCGTCT TCTCCACCGA CATGGACGCC TACGAGGCGC TGCTCAAGGC CGTGATCCGC
ACCGGGGAGC CGGTGACGAA CCTGCACGTG GCCGGGCACC CCACCGCCGA ACCCGGTACC
AACCAGGCCT GGTCGGTGTC GTGCTACCGG ATCGCCGAGT CCTCCGGCCG TCCGGCGGGG
CTGTGTGGCG TGGTCATGGA CATCACCACC CAGGAACGCT CCATGATCGA TTCGGCCCGC
ACCGGCGCGC GGCTGGCGCT GCTCAGCGAG ATCGGGGCCG CGCAGATCAC GACGCTGCGC
GACTTCCGCA AGGCGGCGCA GAAACTGACC GAGATCCTGG TCAGCGACTT CTGCGACATG
GCGGTGGTGG ACGTCGTGCA CAGCATCGTC GCCGGTGAAC TGCCGCCCGA CCACCCCACC
CCCGACACCC TGGTCAGCCG GATCGGCGGC GCCGCCCGCG AACCGTCCGA TGCGTCCCAC
AAGCTCCTCA ACGTCGACAA CCCCCGCCCC GCCTACGAGA CCGACGTGTT CGCGCACGCG
CTGCTGTCCA ACCGGCCGCA GAAGGTCGAC AACCCCCGCA TCGAGCAGGC GCAGGCGCTG
TCCAAGGAGC CCGAGCGCGA GCAGGCCGCC CGGCAGCTGG CGCCCCGCTC GGTCATCATC
GCGCCGCTGC GGGCCCGCGA CGTCACCCTC GGCGCGCTGA CCTTCGTGCG GTTCGGGAAG
CGCAAACCCT TCGACGAGGA GGACGTGGTG CTGGCCGGGG AGATCGCCGA ACGCACCGCG
CTGGGCATCG ACAACTCGCG GCTGTACGGC ACCGAGAAGA ACACCGCGCT GACGCTGCAA
CGCAGTCTGC TGCCGCTGCG GTTGTCGGAG CGGCCCGAGG TCTCGGTGAC CTACCGGTAC
CGGCCCAGCC GCAGCGACCT GCGGGCCGGT GGCGACTGGT TCGACATGAT CACGCTGCCG
GGCCACCGGG TGGCCCTGGT CGTGGGCGAC GTCGCCGGGC ACGGCATCAC GGCGGCGGCC
GCGATGGGGC AGTACCGCAC CGCGGTGCGC ACCCTGGCGC ACATCGGCCT GGAGCCGTCG
GTGCTGCTGA CCCGGCTCAA CGAACTGGCC TTCGACTTCG GCACCGACAT CACCGCGACC
TGCGTCTACG TCCTGTACGA CCCGGTCAAC CACAACTGTG TCATCGCCCG TGCGGGTCAT
CCTCCCCCGG TGCTCGCCAC CACCGATGGG GTGGCGGAGA TACTGGAGGT GGGTCCGGGC
CCGCTGCTGG GTGCCCTGAC CGAGGCCGAG TACCAGGCTG CCGCCGTCGA GACGCCGCCC
GGCACCCGGC TGCTGATGTA CAGCGACGGT GTCGTGGAAT CACGGCACCA GGCGCTGGAC
GACGGCATCG CCGAGCTGGT CCGGCACCTG CGGACCCGAC ACGCGGACGA GGAGGTGTGC
GACCGCATCA TGGAGACTTC CCCCAGTACC GAGGACGACC GAACCGTGTT GTTGGCCCGA
TTTCATGGGC TACGCTCCCC CGGTTAA
 
Protein sequence
MGSGGFADEP MRMSDGMHRL FNSELRIATV IVDATGTITY FGPNAETLTG FRHTEIIGRD 
LQVVSGTSAY FDSREYLSRP PGAAPEFRRL RRSDGSTRAV QVYRHPLPKP TGPPDTLLLV
VDVAENAEAE VGLGLLNAFF QQSTVGFVIM DTELRYVALN EALARLNRRP IVDHLGRRFR
EIVFSTDMDA YEALLKAVIR TGEPVTNLHV AGHPTAEPGT NQAWSVSCYR IAESSGRPAG
LCGVVMDITT QERSMIDSAR TGARLALLSE IGAAQITTLR DFRKAAQKLT EILVSDFCDM
AVVDVVHSIV AGELPPDHPT PDTLVSRIGG AAREPSDASH KLLNVDNPRP AYETDVFAHA
LLSNRPQKVD NPRIEQAQAL SKEPEREQAA RQLAPRSVII APLRARDVTL GALTFVRFGK
RKPFDEEDVV LAGEIAERTA LGIDNSRLYG TEKNTALTLQ RSLLPLRLSE RPEVSVTYRY
RPSRSDLRAG GDWFDMITLP GHRVALVVGD VAGHGITAAA AMGQYRTAVR TLAHIGLEPS
VLLTRLNELA FDFGTDITAT CVYVLYDPVN HNCVIARAGH PPPVLATTDG VAEILEVGPG
PLLGALTEAE YQAAAVETPP GTRLLMYSDG VVESRHQALD DGIAELVRHL RTRHADEEVC
DRIMETSPST EDDRTVLLAR FHGLRSPG