Gene Snas_4163 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSnas_4163 
Symbol 
ID8885364 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStackebrandtia nassauensis DSM 44728 
KingdomBacteria 
Replicon accessionNC_013947 
Strand
Start bp4455717 
End bp4456463 
Gene Length747 bp 
Protein Length248 aa 
Translation table11 
GC content65% 
IMG OID 
Productprotein tyrosine/serine phosphatase 
Protein accessionYP_003512907 
Protein GI291301629 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.591103 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value0.316724 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAATACTT TCACGCGCCC TCACGCGGAT TACGGCAGCG AGCGTTTCAT CCCCTTCGAA 
ACGATCTTCA ATTTTCGTGA CCTCGGTGGC CTGGCCGCGC TGGGCGGCAG CAAGGTTCGC
ACCGGCCTGG TGTTCCGTTC CGACCAGTTC GGCAACGCCT CGTCGGAGGA CATCGACTAC
ATCGTGGACG AACTCGGCGT CAAGACCGTC GTCGACCTGC GCCGCCCCAC CGAGATCGCG
GCCACCGCTT CCTTCCCCGG AGACCGGGGC GTCGCGGTCC ACAATCTCGA ACTCGGCCAC
ATCCGCTGGG AGAACATCGA ACGCGACGCC GGACGGGAGC CGTCCCCGGT GCCGTTCCTC
GTCGAGCGCT ACACCGCGAT GGTCGAGACC GGAGCCATCA CCATCCGCGA CACGCTCAAC
ATGATGATCA CCGCCACGCC GATGGTCTTC CACTGCATGG CCGGAAAGGA CCGCACCGGC
ATCACCGCCG CGGTGGCGCT GAAGCTGCTG GGAGTGTCCG ATGACGACAT CGCCGCCGAC
TACGCCCTGA CCGGCGAGGG CATGCACCGC TACTACGACT GGCGCGCCAG GATCGGCAAG
TCCCCCAACG AGGGTCTGCA CCCGCACGCC GAGGCCATGT ACGGACTGCT GCGCAATATC
GACAATCACT TCGGCAGTAT GGAGAAGTAC GCGCGCGCCA TCGACTTCCA GCGCACCGAC
GAGTTGCGCG CGCACCTGTT GACCTGA
 
Protein sequence
MNTFTRPHAD YGSERFIPFE TIFNFRDLGG LAALGGSKVR TGLVFRSDQF GNASSEDIDY 
IVDELGVKTV VDLRRPTEIA ATASFPGDRG VAVHNLELGH IRWENIERDA GREPSPVPFL
VERYTAMVET GAITIRDTLN MMITATPMVF HCMAGKDRTG ITAAVALKLL GVSDDDIAAD
YALTGEGMHR YYDWRARIGK SPNEGLHPHA EAMYGLLRNI DNHFGSMEKY ARAIDFQRTD
ELRAHLLT