Gene Snas_4162 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSnas_4162 
Symbol 
ID8885363 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStackebrandtia nassauensis DSM 44728 
KingdomBacteria 
Replicon accessionNC_013947 
Strand
Start bp4454316 
End bp4455593 
Gene Length1278 bp 
Protein Length425 aa 
Translation table11 
GC content69% 
IMG OID 
Producthypothetical protein 
Protein accessionYP_003512906 
Protein GI291301628 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.177511 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value0.331518 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACAATCG GTCGGGCAAC CGCGCCCGAG ATACCCGCTA AGGAAAAAGT GAACACCATG 
AGCGGTGAGA ACCCTGACGC CACGCAGTTC GGACGCATAG ACCCCGGCGG CACCGTATAT
CTGAAGACCA GTGCGGGCGA ACGCGTCATC GGGTCGTGGC AGGCCGGTTC GCCCGAGGAG
GGCCTGGCGC ATTTCGCGCG CCGTTACGAC GACCTGGTCA CCGAGGTCGA TCTGGTCGCC
GCGAGGCTCA ACTCCGGCAA CGCCGACCCC GCCTCGACCG CCAGCGCGAT CAAGAAGCTG
CGCGTCAGCC TGGACGAGGC CCACGTGATC GGCGACGTCG ACAAGCTGGC CGCCCGGCTG
GACGAGCTGG CCTCGCGTTC CGAGGCCAAG GTCGCCGAGG CCAAGGAGGC CAAGTCGGCC
GCCCGCGCCG AGGCCGTCGC CCGCAAGGAG GCGCTGGCCA CCGAGGCGGA GAAACTGGCC
GCCGACTCCA CCCAGTGGAA GGCCGCCGGC GACCGCATCA AGGCCATCGC CGAGGAGTGG
AAGACCATCC ACGGCGCCGA CCGCAAGAGC GACCAGGCGC TGTGGAAGCG TTTCGCCGCC
GCCCGCGACG GATTCACCCG CCGCCGGGGC GCCCACTTCG CGTCGCTGGA CAGCGAGCGC
AAGGTCATCG CCACCGCCAA GGAGGAGCTG ATCGCCGAGG CCGAGAAGCT GGCGACCTCC
ACCGACTGGG CCGAGACCGC CGATCAGCTC AAGGGCCTCA TGCGACAGTG GAAAGAGGCC
GGACGGGTGG CTCCCGACGC CGAGCAGAAG CTGTGGAAGC GGTTCCGCGC GGCGCAGGAC
ACCTTCTTCT CGGCCCGCAG TGAGGCCTTC TCGGCCCGCG ACGCCGAGTT CAAGGAGAAC
CTGAACCAGA AGCGGGAACT GCTGACCCAG GCCGAGGCCA TCGACGTCGA GGCCGACCCG
CGCGCCGCCC AGGCGAAGCT GCGCGAGATC CAGGGCCAGT GGGAGGAGAT CGGACGGGTT
CCCAAGGAGT CCGCCGGTGG CCTGCAACGA CGGCTGCGCG CCGTGGACGA CAAGATCCGC
GCCGCCCTCG ACGTGGCCTG GCGCCGCACC CCGGTCTCGG AGAATCCGCT GCTGGCGCAG
ATGCGCGAGC AGGTCGACAA GGCCGAGCGG CAGCTGGAGC GCGCCAAGAA CGACGGGGAC
GCCAAGCGCA TCGCCGCCGC CGAGGAGGCG CTCAATTCGA AGCGGCAATT CCTAGAGCTG
GCCGAAAAGG CACAGTAG
 
Protein sequence
MTIGRATAPE IPAKEKVNTM SGENPDATQF GRIDPGGTVY LKTSAGERVI GSWQAGSPEE 
GLAHFARRYD DLVTEVDLVA ARLNSGNADP ASTASAIKKL RVSLDEAHVI GDVDKLAARL
DELASRSEAK VAEAKEAKSA ARAEAVARKE ALATEAEKLA ADSTQWKAAG DRIKAIAEEW
KTIHGADRKS DQALWKRFAA ARDGFTRRRG AHFASLDSER KVIATAKEEL IAEAEKLATS
TDWAETADQL KGLMRQWKEA GRVAPDAEQK LWKRFRAAQD TFFSARSEAF SARDAEFKEN
LNQKRELLTQ AEAIDVEADP RAAQAKLREI QGQWEEIGRV PKESAGGLQR RLRAVDDKIR
AALDVAWRRT PVSENPLLAQ MREQVDKAER QLERAKNDGD AKRIAAAEEA LNSKRQFLEL
AEKAQ