| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Snas_4160 |
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| Symbol | |
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| ID | 8885361 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Stackebrandtia nassauensis DSM 44728 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013947 |
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| Strand | - |
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| Start bp | 4450812 |
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| End bp | 4453100 |
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| Gene Length | 2289 bp |
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| Protein Length | 762 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | |
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| Product | glycoside hydrolase family 18 |
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| Protein accession | YP_003512904 |
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| Protein GI | 291301626 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 18 |
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| Fosmid unclonability p-value | 0.299546 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCCACAG CGAAGCGAGT ATTCGCCGTC CTCATCGCCC TCGTACTCCT ACCCATGGCC
GTCCTGGTCC CGGCGAGTTC CGCTTCGGCG GCGCCGGCGG GCCTGACCGC CGCGTTCCAG
GCCACCGGTT CCGGTTCGAC CTGGGACGGC AAGTACGTCA TCAGCAACAA CACCGGCGCC
GACATCACCG GCTGGACCCT GGAGTTCGAC CTGCCACCCG GGGTCACCGT CAGCAACGTC
TGGTACGGGA AGCTCTCCCA GAACGGCAAC CACGTCACCA TCATCAACGA GTACTACAAC
GCCAGGGTGG GCGCCGGACG CAACACCGAG CCCTACAGCC CCTCGTTCAG GATCTCGACC
GGCACCGCCC CGCCGGGCTG CAAGATCAAC GGCAACAACT GCGACGGCAC CCCCGACACC
CCGCCCAAGG CGCCGGAGAA CCTGCGCGCC ACCGGATCCA CCACCAAGAC CGTCGCGCTG
GCCTGGGACA AAGCCGTCGC GGGCGACAAC CCGATCGCGT CCTATGAGGT CTACTCCGGC
GGCAGCAACG TCGCCAGCAC CACCGACACC AAGACCGTCG TCACCGGCCT GTCTCCCAAC
AAGGAGTACT CCTTCACGGT GCAGGCGCTG GACACCAAGG GAAACAAGTC CGGACACAGT
AAACCGGTCA CCGCGACCAC ACTGGACCCC AGCGACGACA CCACGCCGCC GACCGCCCCC
AAGGGGCTGC GCTCCACTGG CACAACCTCC GACAGCGTCG GACTGAGCTG GGACGCCGCC
AGCGACGCCA GCGGCATCGC CGGATACGAC GTGTACCGCG ACGGCAAACT GGCCACCTCG
GTCACCGGCA CCTCGGCGAC GGTCTCGGGC CTGGCCCCGG TCACCGAGTA CAGCTTCACC
GTCCGCGCCC GCGACACCTA CGACAACATC TCGTCCGACA GTGCCGCGGT CAAGGCCACC
ACCGACGACG TCATCGGCGG CGGCTCGCAC GCCCGGGTCG GCTACTTTGT CCAATGGGGA
ATCTACGGTC GGCAGTACTT CGTGCGCAAC CTCGACACCT CCGGTGCCGC CGCCAAGCTC
ACCCACATCA ACTACGCGTT CTCCAACATC CACCCCACCA ACCTGACCTG CATGAACGGG
GTCACCAAGG GCACGACGCC CAACCCGCAG GACCCCGACC AGGGGACCGG CGCCGGTGAC
GCCGAGGCCG ACTACGGCCG GGCCTTCTCC GCCGGACAGT CGGTGGACGG CAAGGCCGAC
ACCGGTTGGG AACCGTTGCG CGGCAACTTC AACCAGCTGC GCAAGCTCAA GGCCAAGCAC
CCGCACCTGA AGGTGATGAT GTCGATCGGC GGCTGGACCT ACTCGAAGTT CTTCTCCGAC
GTGGCCGCCA CCGATGCCTC CCGCAAGAAG TTCGTGTCGT CCTGTGTCGA CATGTACCTC
AAGGGCAACC TGCCGACCTA CAACGGCGCC GGTGGCCCGG GTTCGGGAAC CGGGGTCTTC
GACGGCTTCG ACCTCGACTG GGAGTGGCCG GGAGCCGAAG GCCACGCGGG CAACCACATC
AGCGACAAGG ACAAGGCCAA CAACACGCTG CTGTTCGCCG AGTTCCGCAG GCAGATGGAC
GCCCTGTCAC AGCAGACCGG CGAGGAGTAC GAACTGACCG CGTTCACCCC CGCCGACCCG
GCGAAGATCG AGGCGGGTTG GGACATCACC ACCAACGACG GCAACCCGAG CGTCTTCGAC
TACATGGACT TCGCCAACGT GCAGGGCTAC GACTTCCACG GCGCCGGAAG CGACAACTCG
TGGGAGCCCA ACCGCACCGG TCACGCGTCC AACCAGTGGG TCGACGACCA GGACCCGTAC
AACAACCACT TCTCCAACGA GGTGGCCATT CAGGAGTACC TGGACGCGGG CGTCAACCCG
CGCAAGCTCA CCATCGGACT GCCGTTCTAC GGCAGGGGCT GGCAGGGCGT CACCGACGGC
GGCGTCCACG GCGAGTGGCA GGCGGCCAAC GGCGCGGCAC CGGGCCAGTT CGCCGAGGAG
GCGGGCACCC GCGGCTACGC GAACCTGAAG GCCAGCGTGC CCGGCTGCAC GGTCCACCAC
GACGAGCAGT CGCTGTCGAC CTACTGCTAC ACCGGAAACG GCGGTCAGTG GTGGACCTTC
GACGACCCGT GGTCCATCGA ACGCAAGACC GCCTGGGTCA AGGAACAGAA CCTGCTGGGA
ATGATGATCT GGGAGATGTC GGGCGACAAC GGCACTCTCA TGACCGCCGT CGACACCGGC
CTCGGCTGA
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| Protein sequence | MPTAKRVFAV LIALVLLPMA VLVPASSASA APAGLTAAFQ ATGSGSTWDG KYVISNNTGA
DITGWTLEFD LPPGVTVSNV WYGKLSQNGN HVTIINEYYN ARVGAGRNTE PYSPSFRIST
GTAPPGCKIN GNNCDGTPDT PPKAPENLRA TGSTTKTVAL AWDKAVAGDN PIASYEVYSG
GSNVASTTDT KTVVTGLSPN KEYSFTVQAL DTKGNKSGHS KPVTATTLDP SDDTTPPTAP
KGLRSTGTTS DSVGLSWDAA SDASGIAGYD VYRDGKLATS VTGTSATVSG LAPVTEYSFT
VRARDTYDNI SSDSAAVKAT TDDVIGGGSH ARVGYFVQWG IYGRQYFVRN LDTSGAAAKL
THINYAFSNI HPTNLTCMNG VTKGTTPNPQ DPDQGTGAGD AEADYGRAFS AGQSVDGKAD
TGWEPLRGNF NQLRKLKAKH PHLKVMMSIG GWTYSKFFSD VAATDASRKK FVSSCVDMYL
KGNLPTYNGA GGPGSGTGVF DGFDLDWEWP GAEGHAGNHI SDKDKANNTL LFAEFRRQMD
ALSQQTGEEY ELTAFTPADP AKIEAGWDIT TNDGNPSVFD YMDFANVQGY DFHGAGSDNS
WEPNRTGHAS NQWVDDQDPY NNHFSNEVAI QEYLDAGVNP RKLTIGLPFY GRGWQGVTDG
GVHGEWQAAN GAAPGQFAEE AGTRGYANLK ASVPGCTVHH DEQSLSTYCY TGNGGQWWTF
DDPWSIERKT AWVKEQNLLG MMIWEMSGDN GTLMTAVDTG LG
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