Gene Snas_4155 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSnas_4155 
Symbol 
ID8885356 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStackebrandtia nassauensis DSM 44728 
KingdomBacteria 
Replicon accessionNC_013947 
Strand
Start bp4446220 
End bp4447356 
Gene Length1137 bp 
Protein Length378 aa 
Translation table11 
GC content67% 
IMG OID 
Productbeta-lactamase 
Protein accessionYP_003512899 
Protein GI291301621 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.222212 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value0.15208 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGAATAA GAAGGACAGT CATCGCCTGT GCCGCCGCCG TCGTGACCGC CGCGTTCGTG 
GCCGGATGCG GCTCCGCCAG TGCCGGGAAG GATCCCGCGA AGGACACGGC GAAGGAGGTC
GAGACCGACG CGGTCCAAAA GCGGCTCGAC GAGTTCGTCA AGGACGGTGC CATCGTCGGC
GGCGAGGTGA CCATCCGCGA CGGTGACGAC AGCGCGCAGG CGCTGGCCGG AGTGGGAAAC
CGTGAGACCG ACGCGAAGTA CCCGAGCGAC GCGCACGTGC GCGTCGCCAG CGTCACCAAG
GCGTTCACCT CGGCGATGGT GTTGCAGCTG GTGTCCGAGG ACGAGGTCGA CCTCGACGCG
TCCATCGAGG AGTACCTGCC GGGGCTGCTG CACGGCGACG GCATCGACGC CGGGAAGATC
ACCGTCAGAC ACCTGCTGCG CCACCAGAGC GGACTGCCCG AGATCGGCGA CGCCACCCAG
CCGCAGGACC CGGAGGTCAC CTTCACGCCG CAGCAGCTCA TCGACATGGC GCTTGAGAAC
CCCGTCCAGG CCGAACCCGG CGAGAAGATG ATCTACACCA ACACCAACTA CGTGGTGGCC
GGGATGCTCA TCGAGAAACT CACCGGCGAC GACTACGGTG ACGCGCTGAA GGAGCGCATC
ACCAAACCGT TGCGGCTCAA GGACACCTAC CTGCCCGAAC CCGGTGACAC CGGACTGGCG
AAGCCGCACC CCCAGGGTTA CTTCGTCGCG GACGGCGAAC CGAAGGACGT CACCGAGGCC
GACGCCTCCG GCACGTGGGC CTCGGGCGGC ATCGTGTCCT CAGGCGCCGA CCTCAACGCG
TACTTCACGG CGCTGACCGA GGGCGAGGTC GTCGACAAGG CCCAGCTGAA GCAGATGCGC
GACACCGTGC CGATGACCGG CGTTCCCGGC GTCGAGTACG GCCTGGGCCT GATGCGGCTG
CCCACCGAGT GCGAGCTGAA GCTGTGGGGC CAGGCCGGGG ACGTGCCCGG TTTCCAGGCG
ATGACCGCCA CCACCGCCGA CGGGAAGAAG TCGGCGACGA TCGCGATCAA CCAGAGCCCG
AGCGAGAAGT TCGGTCCCGA GCAGCTGCTT GGTCTGCTCA GCACCGCGTT GTGCTGA
 
Protein sequence
MRIRRTVIAC AAAVVTAAFV AGCGSASAGK DPAKDTAKEV ETDAVQKRLD EFVKDGAIVG 
GEVTIRDGDD SAQALAGVGN RETDAKYPSD AHVRVASVTK AFTSAMVLQL VSEDEVDLDA
SIEEYLPGLL HGDGIDAGKI TVRHLLRHQS GLPEIGDATQ PQDPEVTFTP QQLIDMALEN
PVQAEPGEKM IYTNTNYVVA GMLIEKLTGD DYGDALKERI TKPLRLKDTY LPEPGDTGLA
KPHPQGYFVA DGEPKDVTEA DASGTWASGG IVSSGADLNA YFTALTEGEV VDKAQLKQMR
DTVPMTGVPG VEYGLGLMRL PTECELKLWG QAGDVPGFQA MTATTADGKK SATIAINQSP
SEKFGPEQLL GLLSTALC