| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Snas_4141 |
|---|
| Symbol | |
|---|
| ID | 8885342 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Stackebrandtia nassauensis DSM 44728 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013947 |
|---|
| Strand | - |
|---|
| Start bp | 4431091 |
|---|
| End bp | 4432125 |
|---|
| Gene Length | 1035 bp |
|---|
| Protein Length | 344 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 64% |
|---|
| IMG OID | |
|---|
| Product | oligopeptide/dipeptide ABC transporter ATPase subunit |
|---|
| Protein accession | YP_003512885 |
|---|
| Protein GI | 291301607 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 18 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 18 |
|---|
| Fosmid unclonability p-value | 0.186774 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACCACTG TTGAAATAGC AAAAAAGGAC GTCCTCGCCG GACTCGACCC GAGCGCCCCG
TTGTTGCGCG TCAAGAACCT CCAGGTCGAG TTCAACACCC GTGAGGGCAA GGCGAAGGCC
GTCAACGGCG TGAACTTCAC CCTCGAAGAG GGACAGACCC TGGCCATCGT CGGAGAGTCC
GGTTCCGGCA AGAGCGTCAC GTCCCAGGCC ATCATGGGCA TCCTCGACAT CCCACCGGCC
AGAATCGCCG ATGGCGAGGT CCTGTTCCGT GGCGTGGACC TGTTGAAGCT CAAGGCCAAG
GAGATGCGCC CGGTACGGGC CAACCACATC GCGATGGTGT TCCAGGACGC CCTGTCCGCG
CTGAACCCGG TGTGGACAGT GGGCTTCCAG CTGGGCGAGC TGTTCCGCAT CCACCGCGGC
ATGTCCCGCT CCGACGCCAG GAAACGCGCC ATCGAGCTGC TGGACCTGGT GAAGATCCCG
GCCGCGAAAC AGCGCGTCGA CGAGTACCCG CACCAGTTCT CCGGCGGTAT GCGACAGCGC
GTCATGATCG CGATGGCGCT GGCACTGGAT CCCGAGATCC TGATCGCCGA CGAACCGACC
ACGGCCCTGG ACGTGACGGT GCAGGCGCAG ATCATGCGAC TGCTCGCCGA GATCCAGGCC
GAACGTCAGA TGGGTCTGAT CCTGATCACC CACGACCTCG GCGTGGTCGC CGACGTCGCC
GACGACGTGA CCGTCATGTA CGCGGGCCGC GCGGTCGAAC AGGCCACCAT TCACGAGATC
TTCGAGAAAC CGGCTCACCC GTACACCAAG GCGCTGCTGA AGTCGATCCC GCGCCTGGAC
GTCAAGGGAC AGCGGCTGGA GGTCATCGCG GGTCTGCCGC CGGTGCTGAC GAACATCCCA
CCCGGCTGTT CGTTCGCGCC GCGCTGCGGT TATGCCCAGG ACGTCTGCCG CACTGACGAC
CCCGAACTGT TGCAGTTCAC CGGAGAGCGT TTCGCGGCAT GCCACTTCTC GTCGGAGGTC
ATGAACGATG AATGA
|
|---|
| Protein sequence | MTTVEIAKKD VLAGLDPSAP LLRVKNLQVE FNTREGKAKA VNGVNFTLEE GQTLAIVGES
GSGKSVTSQA IMGILDIPPA RIADGEVLFR GVDLLKLKAK EMRPVRANHI AMVFQDALSA
LNPVWTVGFQ LGELFRIHRG MSRSDARKRA IELLDLVKIP AAKQRVDEYP HQFSGGMRQR
VMIAMALALD PEILIADEPT TALDVTVQAQ IMRLLAEIQA ERQMGLILIT HDLGVVADVA
DDVTVMYAGR AVEQATIHEI FEKPAHPYTK ALLKSIPRLD VKGQRLEVIA GLPPVLTNIP
PGCSFAPRCG YAQDVCRTDD PELLQFTGER FAACHFSSEV MNDE
|
|---|
| |