Gene Snas_4130 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSnas_4130 
Symbol 
ID8885331 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStackebrandtia nassauensis DSM 44728 
KingdomBacteria 
Replicon accessionNC_013947 
Strand
Start bp4399652 
End bp4402150 
Gene Length2499 bp 
Protein Length832 aa 
Translation table11 
GC content67% 
IMG OID 
Producthistidine kinase 
Protein accessionYP_003512874 
Protein GI291301596 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones28 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGAGGATCA GACAAAAGGT AGCGCTACTC GTTGCCGCCC CCCTGATAGC GGTGATGGTC 
TTCGCCACGC TGACGGTTCT GACGACTGGC AGTGAAGCCC TTGAGGCCGA ACGCATGCGC
AACCTGGTCA GCGCGAACAA AGCGGCCGGT AGTCTGGCGT ACCAACTCCA GTCCGAGCGC
ACGCTCGCCG TTCAGGCTCT GGTGAACAGC ACCAAGGACG ACAAGGCCGA GGAGTTCCTG
AACCAGCAGA AGGACACCGA CGCGGCGATC GAACGATATC GATCGAGCAT TCGCGAACTC
ACCGACGTAC CTAGCTCCAC CAAGATCAAC CTCGACAACG TCGAAAGCGG ACTGGACAAC
CTCGATGATG TGCGAAAACG CATCTCGGAA CAGAAACAGG GCGCGTCGGC CGCGGCGTTC
ATCTACCGGA TCACCATCGC GGACCTGTTG TCGTACCGCG AATCGGTGCC GCAGGCCGGA
AGCGTGCCCT CCGATGTGGC CGACCGGATC CGGGCGTCGA ACCTGCTGTC GCGAAGCATC
GAGTACCAAA GCATCCAGAC CGAGACCGTG CTGCGGGCCC TGGACCGGGG AGAGCTCTCC
TCGGCGGCGT TCCAGAAGAT CACCGCGGCC AACACCGGTA GCACCGACGC CCTGCTGACG
TTCAACTCGC TGGCCCCTAC GGAATGGCGC GAATGGCTGG ACCGGGCGCT GGCCGGCGAC
GAGCTCAGCC TGACGGCGAC GATGGAGGAC GAGGCGCTTC GTTCCAAGCC CGGCAAGAAG
ATCGACATCG ATCCGGGCGA CTGGGCCAAG GGCATGAACA AGCGCGCCGA ACAGTACGAA
GGCGTCCAGG AGGACATCGA CAAGGCGGTC GTCGAGGAGA TCTCGACGCT GCGCGACCAG
CAGTTCCAGT TGACCTACAC CCAGCTGGGC GGCGTCGTCG TCGCGGTGAT CATCGCACTG
CTGATGGCCG TGTGGCTGGG TAGCCCGATC GTGCGCGGTC TGCGCCGGTT GCGCGACTCG
GCCCACCAGG TCGCCACCGA GGGCCTACCG CGTGCCGTGG CGCAGTTGGA CGACAGCACC
GACCTCGACG GGCAGACACC CGAGGAGTTC GCCAGCCGAG CCACCCCGCC GGTGAAGGTC
AAGGGCCGGG ACGAGCTGGC CGACGTCGGT AAGGCGTTCA ACGAGGTCCA CCAGGAGGCG
ATCCGGGTCG CCGCCCACCA GGCGCTGCTG CGGCTCCACA TCGGTGGAAT GTTCATCCGG
CTCGCCCGGC GCGGCCATTC GCTGGCGGGT CGGCTGACCA ACGTCCTCGA CGAGGCCGAA
CGCAACGAGC AGGATCCCGA CCGGCTGGAC CGGTTGTTCA AACTGGACCA CCTGGTCACC
CTGTTCGGGC GCACCAACGA CAGTCTGCTG GTGCTGGGTG GTGCGGCACC GGCGCGAGTC
CGGCGCACCC ACGAAACGGT CGGCGACGTG CTGACCGCGG CGCAGAGCCA GATCGAGCAG
TACACCAGGG TGCAGATCGG CATGGTCGAC GAAGGCGTGT CGATCAAGGC CAATGCCGTC
GACGATGTGG TGAAGTTGCT GGCCGAGTTG CTGGACAACG CGACCCAGTA CTCCCACCAT
CAGGTCAACG TGACCGCACG ACTGCTGGCC GACCGCTTGG TCGTGCAGAT CAGTGACCGC
GGCATGGGAG TGCCCCCCGA TCGGATGGCG CAGCTCAACG CGCGGTTGAC GTCCCGCAAG
GGTCTCGACC TGGACTCCAT GCAGACCATG GGTTTGACCG TGGTGAGCCA TATCGCGGCG
CGGCACGGCA TTCACGTCGA GTTGCGTGCC GCCGCCGTCG GCGGCACCCT GGCCGAGGTC
TCGCTTCCGG TCGACATCAT CGACATCGAG GCCGCCCCCA AGGCGATCAC GGCGATGCCC
GAGGCCGTCC CGGAGCAGAA GCCGACCGGG ATCCGCAACG CCCCGCTGTT CAAGCGTCGT
CCGCGCCAGC GCGGCAACAA CGCGGGGGCC CGCAGCAACG CGGCGGCACG CGGCAAGCCC
GACAACAGTT CCCGGCGGCC ACGATCCACC GGTGGCCTGC CGCAGATCCG CTTCGACTTC
GGTGCGGTGC CCACCTATCC GGGACATCCA CCCCGGATGG ATCGGGACGA CACTCCCACC
GAGACGTTCC CGGCCGTCCC CCGGCAACGG GACAAGGACC GGCCCCGGCG GATGAACGTC
GGCGGGATGC GCTCCTACGA GGACGGCTGG CAGGCCGCGC AGCGAGCCAC CGCACCGGCC
TCGAATCCCG TTGACGACGG CCTGCCCAAA CGCGACCCGA TGTCGCGACT GGTCCCCGGT
GCCATGGGAC CCACGTCGGC CGAGGTTCCG GCCACCCATG CCGCACCGGC GTACCGGGAT
CCGACCGCGG TCGGCGCATC GTATCTCGCG TACGCCAAGA CCAGACCCGA CAAGCGATCA
CCTTTCTCCC CTGCCGACGA TTCGAGGAAC GAGTCTTGA
 
Protein sequence
MRIRQKVALL VAAPLIAVMV FATLTVLTTG SEALEAERMR NLVSANKAAG SLAYQLQSER 
TLAVQALVNS TKDDKAEEFL NQQKDTDAAI ERYRSSIREL TDVPSSTKIN LDNVESGLDN
LDDVRKRISE QKQGASAAAF IYRITIADLL SYRESVPQAG SVPSDVADRI RASNLLSRSI
EYQSIQTETV LRALDRGELS SAAFQKITAA NTGSTDALLT FNSLAPTEWR EWLDRALAGD
ELSLTATMED EALRSKPGKK IDIDPGDWAK GMNKRAEQYE GVQEDIDKAV VEEISTLRDQ
QFQLTYTQLG GVVVAVIIAL LMAVWLGSPI VRGLRRLRDS AHQVATEGLP RAVAQLDDST
DLDGQTPEEF ASRATPPVKV KGRDELADVG KAFNEVHQEA IRVAAHQALL RLHIGGMFIR
LARRGHSLAG RLTNVLDEAE RNEQDPDRLD RLFKLDHLVT LFGRTNDSLL VLGGAAPARV
RRTHETVGDV LTAAQSQIEQ YTRVQIGMVD EGVSIKANAV DDVVKLLAEL LDNATQYSHH
QVNVTARLLA DRLVVQISDR GMGVPPDRMA QLNARLTSRK GLDLDSMQTM GLTVVSHIAA
RHGIHVELRA AAVGGTLAEV SLPVDIIDIE AAPKAITAMP EAVPEQKPTG IRNAPLFKRR
PRQRGNNAGA RSNAAARGKP DNSSRRPRST GGLPQIRFDF GAVPTYPGHP PRMDRDDTPT
ETFPAVPRQR DKDRPRRMNV GGMRSYEDGW QAAQRATAPA SNPVDDGLPK RDPMSRLVPG
AMGPTSAEVP ATHAAPAYRD PTAVGASYLA YAKTRPDKRS PFSPADDSRN ES