Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Snas_4130 |
Symbol | |
ID | 8885331 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Stackebrandtia nassauensis DSM 44728 |
Kingdom | Bacteria |
Replicon accession | NC_013947 |
Strand | + |
Start bp | 4399652 |
End bp | 4402150 |
Gene Length | 2499 bp |
Protein Length | 832 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | |
Product | histidine kinase |
Protein accession | YP_003512874 |
Protein GI | 291301596 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 28 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | TTGAGGATCA GACAAAAGGT AGCGCTACTC GTTGCCGCCC CCCTGATAGC GGTGATGGTC TTCGCCACGC TGACGGTTCT GACGACTGGC AGTGAAGCCC TTGAGGCCGA ACGCATGCGC AACCTGGTCA GCGCGAACAA AGCGGCCGGT AGTCTGGCGT ACCAACTCCA GTCCGAGCGC ACGCTCGCCG TTCAGGCTCT GGTGAACAGC ACCAAGGACG ACAAGGCCGA GGAGTTCCTG AACCAGCAGA AGGACACCGA CGCGGCGATC GAACGATATC GATCGAGCAT TCGCGAACTC ACCGACGTAC CTAGCTCCAC CAAGATCAAC CTCGACAACG TCGAAAGCGG ACTGGACAAC CTCGATGATG TGCGAAAACG CATCTCGGAA CAGAAACAGG GCGCGTCGGC CGCGGCGTTC ATCTACCGGA TCACCATCGC GGACCTGTTG TCGTACCGCG AATCGGTGCC GCAGGCCGGA AGCGTGCCCT CCGATGTGGC CGACCGGATC CGGGCGTCGA ACCTGCTGTC GCGAAGCATC GAGTACCAAA GCATCCAGAC CGAGACCGTG CTGCGGGCCC TGGACCGGGG AGAGCTCTCC TCGGCGGCGT TCCAGAAGAT CACCGCGGCC AACACCGGTA GCACCGACGC CCTGCTGACG TTCAACTCGC TGGCCCCTAC GGAATGGCGC GAATGGCTGG ACCGGGCGCT GGCCGGCGAC GAGCTCAGCC TGACGGCGAC GATGGAGGAC GAGGCGCTTC GTTCCAAGCC CGGCAAGAAG ATCGACATCG ATCCGGGCGA CTGGGCCAAG GGCATGAACA AGCGCGCCGA ACAGTACGAA GGCGTCCAGG AGGACATCGA CAAGGCGGTC GTCGAGGAGA TCTCGACGCT GCGCGACCAG CAGTTCCAGT TGACCTACAC CCAGCTGGGC GGCGTCGTCG TCGCGGTGAT CATCGCACTG CTGATGGCCG TGTGGCTGGG TAGCCCGATC GTGCGCGGTC TGCGCCGGTT GCGCGACTCG GCCCACCAGG TCGCCACCGA GGGCCTACCG CGTGCCGTGG CGCAGTTGGA CGACAGCACC GACCTCGACG GGCAGACACC CGAGGAGTTC GCCAGCCGAG CCACCCCGCC GGTGAAGGTC AAGGGCCGGG ACGAGCTGGC CGACGTCGGT AAGGCGTTCA ACGAGGTCCA CCAGGAGGCG ATCCGGGTCG CCGCCCACCA GGCGCTGCTG CGGCTCCACA TCGGTGGAAT GTTCATCCGG CTCGCCCGGC GCGGCCATTC GCTGGCGGGT CGGCTGACCA ACGTCCTCGA CGAGGCCGAA CGCAACGAGC AGGATCCCGA CCGGCTGGAC CGGTTGTTCA AACTGGACCA CCTGGTCACC CTGTTCGGGC GCACCAACGA CAGTCTGCTG GTGCTGGGTG GTGCGGCACC GGCGCGAGTC CGGCGCACCC ACGAAACGGT CGGCGACGTG CTGACCGCGG CGCAGAGCCA GATCGAGCAG TACACCAGGG TGCAGATCGG CATGGTCGAC GAAGGCGTGT CGATCAAGGC CAATGCCGTC GACGATGTGG TGAAGTTGCT GGCCGAGTTG CTGGACAACG CGACCCAGTA CTCCCACCAT CAGGTCAACG TGACCGCACG ACTGCTGGCC GACCGCTTGG TCGTGCAGAT CAGTGACCGC GGCATGGGAG TGCCCCCCGA TCGGATGGCG CAGCTCAACG CGCGGTTGAC GTCCCGCAAG GGTCTCGACC TGGACTCCAT GCAGACCATG GGTTTGACCG TGGTGAGCCA TATCGCGGCG CGGCACGGCA TTCACGTCGA GTTGCGTGCC GCCGCCGTCG GCGGCACCCT GGCCGAGGTC TCGCTTCCGG TCGACATCAT CGACATCGAG GCCGCCCCCA AGGCGATCAC GGCGATGCCC GAGGCCGTCC CGGAGCAGAA GCCGACCGGG ATCCGCAACG CCCCGCTGTT CAAGCGTCGT CCGCGCCAGC GCGGCAACAA CGCGGGGGCC CGCAGCAACG CGGCGGCACG CGGCAAGCCC GACAACAGTT CCCGGCGGCC ACGATCCACC GGTGGCCTGC CGCAGATCCG CTTCGACTTC GGTGCGGTGC CCACCTATCC GGGACATCCA CCCCGGATGG ATCGGGACGA CACTCCCACC GAGACGTTCC CGGCCGTCCC CCGGCAACGG GACAAGGACC GGCCCCGGCG GATGAACGTC GGCGGGATGC GCTCCTACGA GGACGGCTGG CAGGCCGCGC AGCGAGCCAC CGCACCGGCC TCGAATCCCG TTGACGACGG CCTGCCCAAA CGCGACCCGA TGTCGCGACT GGTCCCCGGT GCCATGGGAC CCACGTCGGC CGAGGTTCCG GCCACCCATG CCGCACCGGC GTACCGGGAT CCGACCGCGG TCGGCGCATC GTATCTCGCG TACGCCAAGA CCAGACCCGA CAAGCGATCA CCTTTCTCCC CTGCCGACGA TTCGAGGAAC GAGTCTTGA
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Protein sequence | MRIRQKVALL VAAPLIAVMV FATLTVLTTG SEALEAERMR NLVSANKAAG SLAYQLQSER TLAVQALVNS TKDDKAEEFL NQQKDTDAAI ERYRSSIREL TDVPSSTKIN LDNVESGLDN LDDVRKRISE QKQGASAAAF IYRITIADLL SYRESVPQAG SVPSDVADRI RASNLLSRSI EYQSIQTETV LRALDRGELS SAAFQKITAA NTGSTDALLT FNSLAPTEWR EWLDRALAGD ELSLTATMED EALRSKPGKK IDIDPGDWAK GMNKRAEQYE GVQEDIDKAV VEEISTLRDQ QFQLTYTQLG GVVVAVIIAL LMAVWLGSPI VRGLRRLRDS AHQVATEGLP RAVAQLDDST DLDGQTPEEF ASRATPPVKV KGRDELADVG KAFNEVHQEA IRVAAHQALL RLHIGGMFIR LARRGHSLAG RLTNVLDEAE RNEQDPDRLD RLFKLDHLVT LFGRTNDSLL VLGGAAPARV RRTHETVGDV LTAAQSQIEQ YTRVQIGMVD EGVSIKANAV DDVVKLLAEL LDNATQYSHH QVNVTARLLA DRLVVQISDR GMGVPPDRMA QLNARLTSRK GLDLDSMQTM GLTVVSHIAA RHGIHVELRA AAVGGTLAEV SLPVDIIDIE AAPKAITAMP EAVPEQKPTG IRNAPLFKRR PRQRGNNAGA RSNAAARGKP DNSSRRPRST GGLPQIRFDF GAVPTYPGHP PRMDRDDTPT ETFPAVPRQR DKDRPRRMNV GGMRSYEDGW QAAQRATAPA SNPVDDGLPK RDPMSRLVPG AMGPTSAEVP ATHAAPAYRD PTAVGASYLA YAKTRPDKRS PFSPADDSRN ES
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