Gene Snas_4128 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSnas_4128 
Symbol 
ID8885329 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStackebrandtia nassauensis DSM 44728 
KingdomBacteria 
Replicon accessionNC_013947 
Strand
Start bp4397312 
End bp4398121 
Gene Length810 bp 
Protein Length269 aa 
Translation table11 
GC content63% 
IMG OID 
Productcytochrome c oxidase subunit II 
Protein accessionYP_003512872 
Protein GI291301594 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones30 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCGCTTC CGCTTCTCGC CGGTTGTTCC GTTGACGAAG CGTTCGCCTT CGGATGGCCG 
CGCAAACTCC CGACGCCTGA GTCGCGCGAG ATGTTCAACA TGTGGATCGG TTCCACGATC
GCCGCGCTCG CCGTCGGCGT CTTCGTGTGG GGCCTGATCT TCTGGTGCGT CATCCGCTAC
CGCAAGAAGA GCGACGAACT TCCGGTGCAG ACCCGGTACA ACCTCCCGAT GGAGCTGTTG
TTCACGGTCA CGCCGTTCCT CATCATCGCG GTGCTGTTCT ACTACACCGT GATCGTGCAG
TCCAATGTGA CCAAGCTGAC CGAGAACCCC GACACCGAGG TCACCGTCAC CGCGTTCAAG
TGGAACTGGG AGTTCTCCTA CCCCGAGGCC GAGGGCAAGG ACGGCAAGCC GGTCTCCACC
GTCGGCGACA GCGACTACGT CCCGGTGCTG GTGGTCCCCA CCAACGAGCG GATCCGCTTC
ACCGAGGTCT CCGAGGACGT CATCCACTCC TTCTGGGTCC CCGACCTGCT GTTCAAGCGG
GACGTCATGC CCGGCTACGA GAACAAGTTC GAGGTGACGA TCGAGGAGGA GGGCGCCTAC
GTCGGCCGGT GTGCCGAGCT GTGCGGCGCG TACCACTCGA TGATGAACTT CGAGATGCGC
GCGGTGTCCG GCGAGGACTA CAAGAAGTTC CTCAAACAGC TCCAGGCCGG TAAGTCCACG
CCCGAGGCCC TGGAGGCCAT CGGCGAGGAC CCGTACGCGA CCACCACCAA GCCGTTCGAC
ACCAAGCCGA ACTCGCGCAA GGCCAGCTAG
 
Protein sequence
MSLPLLAGCS VDEAFAFGWP RKLPTPESRE MFNMWIGSTI AALAVGVFVW GLIFWCVIRY 
RKKSDELPVQ TRYNLPMELL FTVTPFLIIA VLFYYTVIVQ SNVTKLTENP DTEVTVTAFK
WNWEFSYPEA EGKDGKPVST VGDSDYVPVL VVPTNERIRF TEVSEDVIHS FWVPDLLFKR
DVMPGYENKF EVTIEEEGAY VGRCAELCGA YHSMMNFEMR AVSGEDYKKF LKQLQAGKST
PEALEAIGED PYATTTKPFD TKPNSRKAS