Gene Snas_4112 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSnas_4112 
Symbol 
ID8885313 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStackebrandtia nassauensis DSM 44728 
KingdomBacteria 
Replicon accessionNC_013947 
Strand
Start bp4382454 
End bp4383899 
Gene Length1446 bp 
Protein Length481 aa 
Translation table11 
GC content67% 
IMG OID 
Productamino acid carrier protein 
Protein accessionYP_003512856 
Protein GI291301578 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones24 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGACTTCC TTGTCTCTGT CACCGACTGG CTGTGGACGC CGCTGGTCGT ACTGGCGCTG 
GGCCTCGGCC TGGTGCTGAC CATCCTCACC CGCGCCATCC AGGTGCGCGG ACTGCCCGAC
ACCATCCGGC AGCTGCGAAC CGGCGAGAAA TCCGACGCCG GCGTCTCGTC GTTCCAGGCG
CTGATGCTGA CCCTGTCCAG CCGCGTCGGC GTCGGCAACA TCGCGGGCGT CGCCACCGCC
ATCACCGTCG GCGGCCCCGG CGCGCTGTTC TGGATGGGCG TCACCGGTTT CCTCGGCGCC
GCCAGCGCCT TCGTCGAATC CACGCTCGCC CAGATCTACA AGTCCAAAAC GGACGGGAAG
TTTTTCGGCG GCATCCCCTA CTACATCGAA AAGGGCCTGA AGAAGAAGTG GCTGGCCGTG
ATCGCCGCCG CCACGGCGCT GACGCTGTAC GGCGTGCTGG CGCCGGGCGT GCAGTCCAAC
GCCATCTCAG CGGGATTCGA GCAGGCCATG GGCATCAGCC CGTGGATCAC CGGACTCGTG
GTGGCCGTGG TGTTCGCGTT CGTGATCTTC GGCGGCCGCA AGCGCATCGT CGGCATGGCC
AACATGGTGG TGCCGGTCAT GGCAATCGGC TACCTCCTCG CCGCGGTCGT GGTGCTGGCC
GTCAACGCCC CCGCCATCCC GGGCATGGTC AAGCTCGTGT TCGCCAGCGC GTTCGGCGCC
GACTCGATGT TCGGCGGCAT CGTCGGCGCG GCCATCGCGT GGGGTGTGCG CCGGGCGGTG
TTCTCCAACG TCGCCGGGGT CGGTGAGGGA ACCTACGGTG CGGCCGCGGC CGAGGTGTCG
CACCCGGCCA AACAGGGCCT GGTGCAGTCG TTCTCGATCT ACCTCGACAC CCTGTTCGTG
TGCATGGCCA CCGGGCTGAT GATCCTGGTG ACCGGAATGT ACAACGTGGA GACCGAGGCG
GGCGACAAGC TGGTCACCAA CCTGCCCGGC GTCGAAGCGG GAACCAACAA CACCCAGCAC
GCGCTCGACA CGGTGTTTTC CGGCATCGGT TCGCCGTTCG TGGCCGTCGC GGTGGCGCTG
TTCGCGTTCA CGACCGTCGC GGCGTTCTAC TTCATCGCCG ACACCAGCCT CACCTACCTG
ACCCGGGGCC GCCCCAACGT CTGGCTGGGA TACGCGCTGC GCGTCGCCAT GGTCGGCATG
GTGTTCTACG GCGGCGTGGA GTCGGCGGAC GTCATCTGGG CCATCGGCGA CGTCGGCTAC
GCCTCGCTGG CGTGGGTCAA CATGGTGTGC ATCATCTTCC TCGTCAAACC GGCGCTGAAG
GCGTTGCGAG ACTACGACGC GCAGCGCAGG CTCGGTCTCG ACCCGACCTT CGACCCTGTG
AGACTGGGCA TCGACAACGC CGACTTCTGG ACCGAGCCGA AGACCACCAG CCGCGAAACG
CACTGA
 
Protein sequence
MDFLVSVTDW LWTPLVVLAL GLGLVLTILT RAIQVRGLPD TIRQLRTGEK SDAGVSSFQA 
LMLTLSSRVG VGNIAGVATA ITVGGPGALF WMGVTGFLGA ASAFVESTLA QIYKSKTDGK
FFGGIPYYIE KGLKKKWLAV IAAATALTLY GVLAPGVQSN AISAGFEQAM GISPWITGLV
VAVVFAFVIF GGRKRIVGMA NMVVPVMAIG YLLAAVVVLA VNAPAIPGMV KLVFASAFGA
DSMFGGIVGA AIAWGVRRAV FSNVAGVGEG TYGAAAAEVS HPAKQGLVQS FSIYLDTLFV
CMATGLMILV TGMYNVETEA GDKLVTNLPG VEAGTNNTQH ALDTVFSGIG SPFVAVAVAL
FAFTTVAAFY FIADTSLTYL TRGRPNVWLG YALRVAMVGM VFYGGVESAD VIWAIGDVGY
ASLAWVNMVC IIFLVKPALK ALRDYDAQRR LGLDPTFDPV RLGIDNADFW TEPKTTSRET
H