Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Snas_4074 |
Symbol | |
ID | 8885275 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Stackebrandtia nassauensis DSM 44728 |
Kingdom | Bacteria |
Replicon accession | NC_013947 |
Strand | - |
Start bp | 4353176 |
End bp | 4353964 |
Gene Length | 789 bp |
Protein Length | 262 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | |
Product | transcriptional regulator, DeoR family |
Protein accession | YP_003512819 |
Protein GI | 291301541 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 0.798271 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 22 |
Fosmid unclonability p-value | 0.69418 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGAACGACA CACAGTACGA CAAGGTCAAG AACCCGCAGC AGCGTCAGAA GCTGATGGCT GAGGTCGTCA TGGAGCGGCG CAGCCTGTCG GCGCAGGAGC TGGCGTCCAT TTTCGACGTC AGTGTCATGA CCGTTCACCG TGACCTTGAC GAGCTGGAGC GGCAGGGGAT CGTCCGCAAG TTCCGGGGCG GTGTGACAGC GCAGCCGTCC GGTGTGTTCG AGTCGAACGT TTCGTATCGA CGTAAGTCGA TGCTGAACCA GAAGCGCGCC ATCGCCAAGC AGGCGAGTAA ATACATCGAA CCGGGTATGT CCATCATGCT CGATGACGCT ACGACGACGG CGGAGATGAT CCCGTTGTTG GCGGGGCTGT CGCCGCTGCG GGTCGCGACC AACTATCTGG AGGGGATGCG GCAGCTGAGT CAGCTTGACA ACGTCGGGCT GATGGCGCTG GGTGGTGACT ACGATCCGCT GCACGACTCG TTCATGGGCG GGACGTGTCT GGAGTGCATC GAGTCGCTGC GGGTGGACGC GGTTTTCGTG TCGACGTCGG CGCTTTCGGG GCGGTACGCG TTCCATCAGG AGGATCGGAT CGTCGCGGTC AAGCGGAAGA TGCTGGAGGT CGCGGAGAAG CGGTACCTGT TGATGGACAA CACGAAGCTG GGCAAGGTCG CGTTGTATCG GCTGGTGGAA CTGTCCGAGT TCGATGTGGT GATCGTGGAC TCGGGGATAG ACGAGGCCGC GCTGGCCGAG TTGGAGCGCA ACAACATCAC CTGCGAGGTG GCGACGTAA
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Protein sequence | MNDTQYDKVK NPQQRQKLMA EVVMERRSLS AQELASIFDV SVMTVHRDLD ELERQGIVRK FRGGVTAQPS GVFESNVSYR RKSMLNQKRA IAKQASKYIE PGMSIMLDDA TTTAEMIPLL AGLSPLRVAT NYLEGMRQLS QLDNVGLMAL GGDYDPLHDS FMGGTCLECI ESLRVDAVFV STSALSGRYA FHQEDRIVAV KRKMLEVAEK RYLLMDNTKL GKVALYRLVE LSEFDVVIVD SGIDEAALAE LERNNITCEV AT
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