Gene Snas_4074 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSnas_4074 
Symbol 
ID8885275 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStackebrandtia nassauensis DSM 44728 
KingdomBacteria 
Replicon accessionNC_013947 
Strand
Start bp4353176 
End bp4353964 
Gene Length789 bp 
Protein Length262 aa 
Translation table11 
GC content61% 
IMG OID 
Producttranscriptional regulator, DeoR family 
Protein accessionYP_003512819 
Protein GI291301541 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.798271 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones22 
Fosmid unclonability p-value0.69418 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGAACGACA CACAGTACGA CAAGGTCAAG AACCCGCAGC AGCGTCAGAA GCTGATGGCT 
GAGGTCGTCA TGGAGCGGCG CAGCCTGTCG GCGCAGGAGC TGGCGTCCAT TTTCGACGTC
AGTGTCATGA CCGTTCACCG TGACCTTGAC GAGCTGGAGC GGCAGGGGAT CGTCCGCAAG
TTCCGGGGCG GTGTGACAGC GCAGCCGTCC GGTGTGTTCG AGTCGAACGT TTCGTATCGA
CGTAAGTCGA TGCTGAACCA GAAGCGCGCC ATCGCCAAGC AGGCGAGTAA ATACATCGAA
CCGGGTATGT CCATCATGCT CGATGACGCT ACGACGACGG CGGAGATGAT CCCGTTGTTG
GCGGGGCTGT CGCCGCTGCG GGTCGCGACC AACTATCTGG AGGGGATGCG GCAGCTGAGT
CAGCTTGACA ACGTCGGGCT GATGGCGCTG GGTGGTGACT ACGATCCGCT GCACGACTCG
TTCATGGGCG GGACGTGTCT GGAGTGCATC GAGTCGCTGC GGGTGGACGC GGTTTTCGTG
TCGACGTCGG CGCTTTCGGG GCGGTACGCG TTCCATCAGG AGGATCGGAT CGTCGCGGTC
AAGCGGAAGA TGCTGGAGGT CGCGGAGAAG CGGTACCTGT TGATGGACAA CACGAAGCTG
GGCAAGGTCG CGTTGTATCG GCTGGTGGAA CTGTCCGAGT TCGATGTGGT GATCGTGGAC
TCGGGGATAG ACGAGGCCGC GCTGGCCGAG TTGGAGCGCA ACAACATCAC CTGCGAGGTG
GCGACGTAA
 
Protein sequence
MNDTQYDKVK NPQQRQKLMA EVVMERRSLS AQELASIFDV SVMTVHRDLD ELERQGIVRK 
FRGGVTAQPS GVFESNVSYR RKSMLNQKRA IAKQASKYIE PGMSIMLDDA TTTAEMIPLL
AGLSPLRVAT NYLEGMRQLS QLDNVGLMAL GGDYDPLHDS FMGGTCLECI ESLRVDAVFV
STSALSGRYA FHQEDRIVAV KRKMLEVAEK RYLLMDNTKL GKVALYRLVE LSEFDVVIVD
SGIDEAALAE LERNNITCEV AT