| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Snas_4053 |
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| Symbol | |
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| ID | 8885254 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Stackebrandtia nassauensis DSM 44728 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013947 |
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| Strand | - |
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| Start bp | 4320902 |
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| End bp | 4322032 |
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| Gene Length | 1131 bp |
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| Protein Length | 376 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | |
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| Product | glycoside hydrolase family 18 |
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| Protein accession | YP_003512798 |
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| Protein GI | 291301520 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 14 |
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| Fosmid unclonability p-value | 0.0226392 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAACGAA CCCGCGTCCT CAGCCTCGCC GCGATCCCGG TACTCGCGGC CGGGCTGGCC
ATCACCACCA CCTCGGCCGG ACACGCCGAC CCCAACCCGC CCGACCGGGC CGAACTGCCG
AAGCACGCCC TCATCGGCTA CCTGCACTCC AGCTTCGCCA ACGGATCCGG CTACCTGCCG
ATGTCCGAGG TCCCCGACGA ATGGGACATC ATCAACCTCG CCTTCGGCGA ACCCACCTCC
GTCACCTCCG GCGACATCCA GTTCGACCTG TGTCCCAAGG AGGAATGTCC GAATGTGGAA
ACCGAGGACG AGTTCAAGGC CGCGATCAAG GACAAGCAGG CCAAGGGAAA GAAGGTGCTG
CTGTCCATCG GCGGCCAGAA CGGCCAGGTC CAGCTGACCA CCGCCGCCGC CCGGGACAAG
TTCGTCGAAT CCGTGGGCGG CATCATCGAC GAGTACGGCC TGGACGGTCT CGACGTCGAC
TTCGAGGGAC ACTCGCTGTA CCTCGACTCC GGCGACACCG ACTTCGAGAA CCCCAAGACC
CCGGTCATCG TCAACCTGAT CGACGCCCTG GACGCGCTCA AGGCCCGCTA CGGCGACGCC
TTCACCCTCA CCATGGCACC CGAGACCTTC TTCGTCCAGG TGGGACACCA GTTCTACGGC
GGAGCGGGCG GCGGCGACAA CCGCACCGGC GCTTACCTTC CGGTGATCCA CGCGGTGCGC
GACTACCTGA CCGTCCTGCA TGTACAGGAC TACAATTCCG GTCCCGTGAT GGGACTGGAC
GGCCAGTACC ACAACATGGG CAACGCCGAC TTCCACATCG CGATGACCGA CATGGTCAAG
GCGGGCTTCC CGGTGGCCAG CACCGGAAAG ACCTTCCCGG GCCTGCGCGA GGACCAGATC
GGCTTCGGCG TCCCGGCCGC CACCAGCGCC GGAAACGGCC ACACCTCACC CGAGGCGGTG
CAGCAGGCCC TCGGCTGTCT GGCCACAGGG GAGGACTGCG GCGGCTACGA ACTGCGCGGC
GGCCCGTCAC CCGCGATCCG CGGCCTGATG ACCTGGTCGA TCAACTGGGA CAACTACTAC
AAGTGGGAGT TCATGAACGC GCATGAGCCG TACCTGAACG GACTGCCGTA G
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| Protein sequence | MKRTRVLSLA AIPVLAAGLA ITTTSAGHAD PNPPDRAELP KHALIGYLHS SFANGSGYLP
MSEVPDEWDI INLAFGEPTS VTSGDIQFDL CPKEECPNVE TEDEFKAAIK DKQAKGKKVL
LSIGGQNGQV QLTTAAARDK FVESVGGIID EYGLDGLDVD FEGHSLYLDS GDTDFENPKT
PVIVNLIDAL DALKARYGDA FTLTMAPETF FVQVGHQFYG GAGGGDNRTG AYLPVIHAVR
DYLTVLHVQD YNSGPVMGLD GQYHNMGNAD FHIAMTDMVK AGFPVASTGK TFPGLREDQI
GFGVPAATSA GNGHTSPEAV QQALGCLATG EDCGGYELRG GPSPAIRGLM TWSINWDNYY
KWEFMNAHEP YLNGLP
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