Gene Snas_4045 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSnas_4045 
Symbol 
ID8885246 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStackebrandtia nassauensis DSM 44728 
KingdomBacteria 
Replicon accessionNC_013947 
Strand
Start bp4314545 
End bp4315396 
Gene Length852 bp 
Protein Length283 aa 
Translation table11 
GC content66% 
IMG OID 
Producthypothetical protein 
Protein accessionYP_003512790 
Protein GI291301512 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.79255 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value0.0229599 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGATTGC CCGCCGCCGT CGTGACCGGC GTCGTCGCTG TCGTCGCCGT GTCCAGTGTG 
ATCACCGGTA CCACCCTGGC CATCGCCGAC GGCAACGAGA CCGACGCCCC GAAGCTGAAG
AACCCGACCA GCTGTGTGTC CTCCGATCCG GAGCTGGCCG AGCGGCTGGC CAGCCAGCTG
GATGCCGCCG TGGCCGCCAA ACCCGACGGG ATCGGTTTCA GCATCAGTGA TCCGGTGACC
CAGACCGCCT GTCACTTCGG GTCCGACCGG GTCATCAAGA CGGCCAGCAC CATCAAGGTG
ACCCTGGTGG CCGCCCTGCT GCACCTCGCG CAGGAGGAGG GGCGAGAGCT GACCCAGAAG
GAGAAGGACA ACAGTCACGC CGCCATCACC GTGTCGGACA ACAAGGCCGC CACCGCGATC
TACGAGCAGC TGGGGGCCGA GCGCATCGAG GCTTTCGTGG CGACTCTGGG CATGGTCAGC
ACGCAGGTGC GGCCGACCTG GGGTTCGTCG TCGACGACCA GTGCCGATCA GGAGATCCTG
TTGCGCACCC TGACGAACCC GGGTGAGATC CTCACCGACC CCAACCGGGC GTACCTGCTG
GACCTGATGG CCAATGTGGT GCCCGAACAG GCTTGGGGCA CCACCGACGG GGCCCCGGAC
ACCGTCACCA AGCACGTCAA GAACGGCTGG GTCGAGGAAT ACGGCTGGAC CAGCAGTCTG
GGCACTTTCG ACGGTGCCGA CCGCAACTAC GTGATGGCGG TGCTGACCAA CAACAGCACC
ACATTGGACG AGGGCATCGA GCGCATCGCC AAGGTGTCGC GGGTGGTCCA CACCGAACTC
AACGCCGTCT AG
 
Protein sequence
MRLPAAVVTG VVAVVAVSSV ITGTTLAIAD GNETDAPKLK NPTSCVSSDP ELAERLASQL 
DAAVAAKPDG IGFSISDPVT QTACHFGSDR VIKTASTIKV TLVAALLHLA QEEGRELTQK
EKDNSHAAIT VSDNKAATAI YEQLGAERIE AFVATLGMVS TQVRPTWGSS STTSADQEIL
LRTLTNPGEI LTDPNRAYLL DLMANVVPEQ AWGTTDGAPD TVTKHVKNGW VEEYGWTSSL
GTFDGADRNY VMAVLTNNST TLDEGIERIA KVSRVVHTEL NAV