Gene Snas_4044 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSnas_4044 
Symbol 
ID8885245 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStackebrandtia nassauensis DSM 44728 
KingdomBacteria 
Replicon accessionNC_013947 
Strand
Start bp4313558 
End bp4314373 
Gene Length816 bp 
Protein Length271 aa 
Translation table11 
GC content69% 
IMG OID 
Producttranscriptional regulator, MerR family 
Protein accessionYP_003512789 
Protein GI291301511 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value0.0218982 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTTTGCCA TTGGAGACTT CGCCCGGATG GGCCGCGTGT CGGTGCGGAT GCTGCGCCAC 
TACGACGCGC TCGGGCTGCT GCGTCCGGCC CGTGTCGACG CCGGTACCGG CTATCGGCAC
TACGAGGCCG CGCAGCTTGC GCGGCTCAAC CGGATCGTCG CGCTGAAGGA CCTGGGGTTC
ACGCTGGAGC AGGTCGCGAC GTTCCTGGAC GAGCAGGTCA GCACGGTCGA GCTGCGGGGC
ATGCTGCGGT TGCGTCGGGC CGAGGCGGCG GCCGAACTGG CCGCCGCCCG GGATCGGCTC
ACCGGTATCG AGGCGCGGTT GTCGGCGATC GAGGCCGAGG GGCGGTTGCC CAGCGGCGAG
GTCGTGGTCA AACGGGTCGC TGCCACCCGG GTCGCGGAGC TGACGGCACC GGCTGACAGT
TACGCGTCGG TCGACATCAC CCCCGTGATC AGGCCGTTGT ACTCGCGGTT GTGCCGGTTG
CTCGATGACG CGGGTGTGAC GCCGGTGGGT CCGGCGGTCG CGTCGTATGA GGATCGGGGT
GACGGGGTGC TGGTGCACGC GGCGTTTCCG GTGCCCGCCG AGGCGTCGGA GCGTTCGGAG
TTGTCGGTGG TGACGTTGCC CGCGATCGAG GCGGCGACGG TGATCCACCA CGGTGCGATG
GACGAGTCGG ACGCCTCGTT GCAGCTGCTG GCCCGGTGGA TCGACGCCAA CGGGTATCGC
AGCACCGGTT ACGCGCGGGA GGTCAACCTG GAGTGCCCGC CCGACCCGGC GCAGTGGGTG
ACAGAACTGC AGGAATCCAT TACGGCTGAA CACTGA
 
Protein sequence
MFAIGDFARM GRVSVRMLRH YDALGLLRPA RVDAGTGYRH YEAAQLARLN RIVALKDLGF 
TLEQVATFLD EQVSTVELRG MLRLRRAEAA AELAAARDRL TGIEARLSAI EAEGRLPSGE
VVVKRVAATR VAELTAPADS YASVDITPVI RPLYSRLCRL LDDAGVTPVG PAVASYEDRG
DGVLVHAAFP VPAEASERSE LSVVTLPAIE AATVIHHGAM DESDASLQLL ARWIDANGYR
STGYAREVNL ECPPDPAQWV TELQESITAE H