Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Snas_4009 |
Symbol | |
ID | 8885210 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Stackebrandtia nassauensis DSM 44728 |
Kingdom | Bacteria |
Replicon accession | NC_013947 |
Strand | - |
Start bp | 4275459 |
End bp | 4276163 |
Gene Length | 705 bp |
Protein Length | 234 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | |
Product | Polypeptide-transport-associated domain-containing protein FtsQ-type |
Protein accession | YP_003512754 |
Protein GI | 291301476 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 0.514475 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 27 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGTGAACA AGCGCCCGGG ACGAAAGCGC GGCCTCGGCC GCAAGGCCCG CCTGCTGGTC ACGGCCGTGG CCGGTGCCGC CGTCCTTGCG GGGGCGAGTC TGTGGATCGT CTACGGGACC GGCGCCTTCG CCGTGGAGTC CGTTGTGGTG CGTGGCGCGA GTTTCACCGA CCACGAACAG GTGACGAAGG CGGCCGGGGT GGCCGAGGGC ACCGCCATCG CCGCCGTGGA CACCGACGAG GTGGCGCGGC GGGTGTCCAA GGTCCCGGCG GTGCGCACCG CGACGGTCAG CCGGGACTGG CCGCACGGCA TCGTCATCAC CATCAAGGAA CGCAAGCCCA GGCTGGCGGT ACCGAAGGAC AGAAAATTCA TCTTGGTGGA CGAGGCCGGT GTGGCCTTTC GAACGGTGTC GAAGCAGCCC AGCGGCACGG TGAAGACCAC TGTGTCCGAT CCGGCCCGTG ACGACGCCGC CACGCAGGCG GTTTTGTCGG TGTTGCCGAA ACTGTCACCC GAACTGGAGA AGCTGCTGGT CAGCGTCGAG GCGCCGACCC AGTCCCGGAT CGAACTGAAG CTCAAGGGGT CCCGTACCGT CTTTTGGGGA GACTCTTCAC GATCGGACCG CAAGGCCGAA GTCGCGACGT CTTTGCTCAA GCGAACCGAG AAACATCTCG ACGTCAGCGC ACCGGACGTA CCAACGGTGA GCTAA
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Protein sequence | MVNKRPGRKR GLGRKARLLV TAVAGAAVLA GASLWIVYGT GAFAVESVVV RGASFTDHEQ VTKAAGVAEG TAIAAVDTDE VARRVSKVPA VRTATVSRDW PHGIVITIKE RKPRLAVPKD RKFILVDEAG VAFRTVSKQP SGTVKTTVSD PARDDAATQA VLSVLPKLSP ELEKLLVSVE APTQSRIELK LKGSRTVFWG DSSRSDRKAE VATSLLKRTE KHLDVSAPDV PTVS
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