Gene Snas_4006 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSnas_4006 
Symbol 
ID8885207 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStackebrandtia nassauensis DSM 44728 
KingdomBacteria 
Replicon accessionNC_013947 
Strand
Start bp4272830 
End bp4273411 
Gene Length582 bp 
Protein Length193 aa 
Translation table11 
GC content65% 
IMG OID 
Producthypothetical protein 
Protein accessionYP_003512751 
Protein GI291301473 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.0827549 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones28 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGGCGCTA TGCGCAAGGC GGGCGTCTGG CTCGGCTTGA TCGAAGATGA CGAGGACCGT 
CGCTACGACG AATATGACGA GTCCGACGAG TTTGACGATC GTGCCGTCCG CGCCAGCGAT
GACCAGTCGC GGGTTCGGAG GTTGAGTCGC GCCGAGCGCG GCTCCGACCG GGGCACCGAG
CGTTCGACCG TCCGGCACCT GTCCCGTCCC TCGTCGACCG TCACCTCGTT GACCAGGGAC
AATCTCGCCC TCGCGCCGGA ACCGGCCGCG AGGGAACGGC CGATGCTGGT CACCGAGAAC
CCGGACTACC GGATCACCAC GGTGCACCCC ACCACGTACA ACGAGGCCCG CACCGTCGGT
GAGGCCTATC GCGACGGTAC CCCGGTGATC ATGAACCTGT CCGAACTGGA CGAGTCGGAC
GCCAAGCGGC TTGTCGACTT CGCCGCCGGA CTGGTCTTCG GATCCCGTGG TAGCTTCGAT
CGGGTTACCA ACCGGGTTTT CCTGTTGTGC CCGGCGAACA TTCAGGTGAC CGCCGAGGAC
AAGGCGAAGA TCGCCGAAGG CGGGTTCTTC AATCAGAGCT GA
 
Protein sequence
MGAMRKAGVW LGLIEDDEDR RYDEYDESDE FDDRAVRASD DQSRVRRLSR AERGSDRGTE 
RSTVRHLSRP SSTVTSLTRD NLALAPEPAA RERPMLVTEN PDYRITTVHP TTYNEARTVG
EAYRDGTPVI MNLSELDESD AKRLVDFAAG LVFGSRGSFD RVTNRVFLLC PANIQVTAED
KAKIAEGGFF NQS