Gene Snas_3996 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSnas_3996 
Symbol 
ID8885197 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStackebrandtia nassauensis DSM 44728 
KingdomBacteria 
Replicon accessionNC_013947 
Strand
Start bp4264144 
End bp4265229 
Gene Length1086 bp 
Protein Length361 aa 
Translation table11 
GC content70% 
IMG OID 
Producthistidinol-phosphate aminotransferase 
Protein accessionYP_003512741 
Protein GI291301463 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones23 
Fosmid unclonability p-value0.784945 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGACCGACG AGATCCAGCG GCTGCTGCGC GACGACCTGC GCGGCCGCAG CCCTTACGGC 
GCGCCGCAAC TGGACGTCGC GGTGCGGCTC AACACCAACG AGAACTCGTA CCCGCTGCCG
GGCGAGGTCG CCGCGTCCAT CGAGAAAGCA CTGTCGGGTG TGGTGCGCGA CCTCAACCGC
TACCCCGACC GGGACGCGGT CGAACTGCGT CGCGACCTGG CCAACTACCT GGGCCACGAC
CTCGACGTGG CGAACCTGTG GGCCGCCAAC GGATCCAACG AGATCCTGCA GCAACTGCTA
CAGGCCTTCG CCGGACCCGG CCGGACCGCG CTGGGCTTCA CGCCCGCCTA CTCCATGCAC
CCGCTCATCT CGGCGTCCAC CGGCACCGCC TGGGTCGACG GCCACCGCGA GGCCGACTTC
GGACTGTCCG CCGAGCGCGC CGTCGACCAG GTGACACGGC ACCGTCCCGA CGTGGTGTTC
CTGTGCTCGC CCAACAACCC GACCGGCACC GCGCTCGGCC TCGACGTCGT GGAAGCCGTG
CTGGAAGCCG GAACCGGCCT GGTGGTCGTG GACGAGGCCT ACGCCGAGTT CGCCCGCGAC
GGCGTGCCCA GCGCGCTGCG GCTGCTGGGG GGCAACCCGC GGCTGGTCGT CACCCGCACC
ATGAGCAAGG CCTTCGGTTT CGCCGGGGCC CGCTTGGGCT ACCTGGCCGC CGACGCGGCG
GTCGTGGACG CCCTGCAACT GGTGCGGCTG CCCTACCACC TGTCCTCGCT GACCCAGGCG
GCGGCGCGCG CGGCCCTCGG CCACGCCCCG ACCCTGCTGT CCACAGTGGC AGCCATCAAG
GAGCAACGGG ACCGCGTCGT CACCGAACTG ACCCGGCTGG GTCTGGCCGT CGCGCCCAGC
GACGCGAATT TCGTACTGTT CGGCTCCCTG GCCGATTCCA AAGCCGTGTG GCGCTCGTTG
GTAGATAGAG GGGTGCTGAT ACGTGATGTC GGCCTGGACG GCTGGCTGCG CGTCACCGCC
GGAACCCCCG ACGAGACCAC CGCGTTCCTC GAAGCACTGA CAGCCGTACT GAAGGAGAAC
CCGTGA
 
Protein sequence
MTDEIQRLLR DDLRGRSPYG APQLDVAVRL NTNENSYPLP GEVAASIEKA LSGVVRDLNR 
YPDRDAVELR RDLANYLGHD LDVANLWAAN GSNEILQQLL QAFAGPGRTA LGFTPAYSMH
PLISASTGTA WVDGHREADF GLSAERAVDQ VTRHRPDVVF LCSPNNPTGT ALGLDVVEAV
LEAGTGLVVV DEAYAEFARD GVPSALRLLG GNPRLVVTRT MSKAFGFAGA RLGYLAADAA
VVDALQLVRL PYHLSSLTQA AARAALGHAP TLLSTVAAIK EQRDRVVTEL TRLGLAVAPS
DANFVLFGSL ADSKAVWRSL VDRGVLIRDV GLDGWLRVTA GTPDETTAFL EALTAVLKEN
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