| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Snas_3987 |
|---|
| Symbol | |
|---|
| ID | 8885188 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Stackebrandtia nassauensis DSM 44728 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013947 |
|---|
| Strand | + |
|---|
| Start bp | 4256300 |
|---|
| End bp | 4257073 |
|---|
| Gene Length | 774 bp |
|---|
| Protein Length | 257 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 68% |
|---|
| IMG OID | |
|---|
| Product | beta-lactamase domain-containing protein |
|---|
| Protein accession | YP_003512732 |
|---|
| Protein GI | 291301454 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 16 |
|---|
| Plasmid unclonability p-value | 0.706134 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 25 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACCACGG CAGGGCTGCG ACTCAACGTA CTCGGCAGCG CCACCCCATA CCCGCGCCCT
GACAATCCGT GCTCCGGCTA CCTGCTCACC AGCGGCGACA CGAGGATCTG GCTGGACGCG
GGAACCGGAA CCCTCGCCGC GCTGCAACGA CACGTCCGCC TCACCGACCT CGACGCCATT
TGGATCTCCC ACGCCCACGC CGACCACAGC GCCGACCTTT TGACCGCGTA CTACGCCTTG
CTCTACGCGG ACCTTCGCCT CACCGCACCG CTCCCGCTCT ACGGGCCACC CGGCATCGCC
GATCGGCTAG CCGACTTCCT CACCAACGGC CCCGAACGAA GCCCCGTCGA GCGGGCCTTC
ACCATCCACG AACTACACGA CGGGCATCGC GCCGAGATAG GTCCACTGTC ACTGACTACC
CGGGCGGTCG AGCACGGGCT CCCGGCATTC GCGGTCCGCG TCGACGACGG TGACGTCTCG
CTGGTCTACT CCGGCGACAC CGCGCCCTGC GCCAAGCTCA CCGAACTGGC CACCACCTGC
GACACGCTGC TATGCGAAGC CGACAGCGCC GAACCCAGCA CCCCACCGGT TCACCACACT
CCCGAAGACG CGGGCACGAC CGCCACCGCA GCTGGCGTGG GCCGATTGAT CATCACCCAC
GTCGGCCCGT TCCTCACCCC CGAGCAAGCC GTCGACCGAG CCGCCGCGAC GTTCTCCGGC
CCGATCGGCT ACGCCGCGCC AGGAACCACC ATCGACATCA CGCCGATGCC CTGA
|
|---|
| Protein sequence | MTTAGLRLNV LGSATPYPRP DNPCSGYLLT SGDTRIWLDA GTGTLAALQR HVRLTDLDAI
WISHAHADHS ADLLTAYYAL LYADLRLTAP LPLYGPPGIA DRLADFLTNG PERSPVERAF
TIHELHDGHR AEIGPLSLTT RAVEHGLPAF AVRVDDGDVS LVYSGDTAPC AKLTELATTC
DTLLCEADSA EPSTPPVHHT PEDAGTTATA AGVGRLIITH VGPFLTPEQA VDRAAATFSG
PIGYAAPGTT IDITPMP
|
|---|
| |